| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0149 |
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| Symbol | |
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| ID | 8223715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 164449 |
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| End bp | 168027 |
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| Gene Length | 3579 bp |
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| Protein Length | 1192 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644928028 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003084585 |
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| Protein GI | 255033964 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.413609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGCT TTCAGCTATT CTGGCTCATT GTGCTCTTTT GCCCGATCGT GGCCGAAGCA
CAGTTTGTTT TTCAGAACCT TAAAGAGGAA GACGGGCTCA GTGCGAAAGA CGTCCGCTGC
TTATACAAAG ACGCTGACGG CTTCCTTTGG ATAGGCACAG GCAATGGGCT GAACCGCTTC
GACGGCCACG TGATCAAGGC CTATCAGGAT GTAAATTCGG TGAGTACGAT CGAGGTCAAT
GGCATTCATC CGATAGACGG CAAGGCGAAT CTGCTGGTTG CGACTTCCCG CGGGCTGAAA
CTTTTCAACA AATCGACTGG GAAGTACCGT GCTGATAACC GCTGGAAGGC CCTGGCGAAC
AGGCCTATTC TTTCCGTCAA GGAGGACGAT CAGCACCGTC TATGGTTTAT CTGCCACAAA
GACATCTTTA TTTATGATGG AAAGAAAGTC AGGAAATTGG CCGAGTTGCT GCCCTGGGCG
GAACGCGTCG CCCATGCAGA CCTGTCGTTC GCCGCACGCA GCGCATTCTG CTGGGATGCA
AAGCGAAAGG GTTTTTGGGT AGGCGGATAC GGCTGCTTTT TTATCGACTG CGCCAATGAG
ACGGTGTATG ATAGCACCCA TAACCCCCAC CGCTGGCCGA TCCTGAATAA AAGGCAGGTC
ACCGCGATTA CAATGGATAA CCAGTACAAC CTTTGGTATG GCTCTACCGT CGATTTTTCG
CTCCATTTCT CGAAACCCGA TTTACAGAGC GATACGGCCT ACCTGCATTT GGATAACGTG
CGTTCCACAG ATGGTGTGAA TTGCCTGTTC GTCGACGACC AGGACAGGTT ATGGATTTCT
ACCTGGATGT ACGCTGCGTA TGTGAAGGAA GCAGGCAAAC CGATCCGCAA AATTCCATAC
AGCCAGGACG CCGGCTATTC GATCGCCTAT GGGCATTTTA ATGGAGTTAT TGAGGATGAA
GAAAAAGACC TGTGGTTTGC CACCATCAAC GGGTTGAGCA AACTCACTTA CAACAACCCG
TTTGAGATAG TTTACAAGCT GCCGAGCAGG CCGTTCTTTC TACAAGTCAG TTTCGCCGCC
ATTAATGTAA TAGCAGCCAG AGGCGATAGT ATTCTGGCAA TGAAAGAGGA CGGTTTGGTC
CTCCTCAAAC AAAACCAGCA GAGTTTTACG CACTATACGG CTTCCAAAGA GCGCGTGATC
AAAAACAGGT TTTTCAGCTG CGCTTTCGCG AATGACACCT GGTGGTTCGG CGGGAATGGC
GGGCTATATT TTCTTCGGAA GGGCGATAAG GATATCAGGA AATTCAGCCA TCCTCGAATC
AAACCACCGT TGACGGCGAG CGACATTGTC GTAGCAGATA ATCAGGGAAG GATCTGGTTT
CAGATCAGAA CCAATGCATT TTACCGGTAT AACCCCAAAA CGAATGAATG CGAACGCTTC
AATGGCACGG ACAGTCGCTA TGGCCGGTTC AATTTTAAGT CTTGCCAGAG TGCTCTGACG
TTGAGAAACG GCGATGTGCT CTTTGCCATG CGAGGCGAAG GTATTCTTCG ATTTTCCGAA
CAAACGCAGC GATTTACGGT CATTTCCGTG CCTGATAAGG ATCGTTTTTA CGCCATGCAG
CTCATGGAAG AAACCGATGG CAACCTTTGG ATGGCCGACC GTGACCGCGG TCTTTATAAA
CTGAACATTA ACGGCCAATA TATCGACAGT CTCACACCAA GAAACGGTCT GCTGACAACG
CCCATCAACA GCATCGCCAG AGATAATCGC GGGGCAATTT GGGTCGCCGG GCCAGGCGGA
TTATCATTCT TTTTTCCTAA AACAAAAAAG GTGACCCGTG TGAGCATCAA TCTCGGCAAG
ACACTGCAAG ATTACTGGAA TTACGTGCTC ACCACGCCAG ACCACATTTA CGCGGCCATG
CTGGACCATA TCGTGGTGAT CGATCCGACG AAGTTCACCA AAATCGTAGT CAGTAAGCCG
CCGCATATTA CATCTGTGAA GGTGCTGGGA AAAGAGGTCT CCGACTTCCT GCCCGCGTCG
CTGATGTTGC TGGCAGACAA GGATTTCATT ACACTGCAAT TCGCATCATT AAAGCATCGC
GATATTCCCA CATTGCAATA CAGTTATCAA TTGAAAGACA TCGAAGAACG ATGGGTGTAT
GCCGGGCGTA ACATGACGGC CAGTTACAAT AGCCTGCCAC CGGGAAACTA TGTTTTCAAA
GTGCGTAGCA CCGACGAACA TGGCAGATGG ATGAAAGAGG TTTCAGTACT CAAAATCAAG
ATACTTCCTC ATTGGTGGGA GAGCTGGTGG TTCCTGATCG TCGTGGGCTG CGTATCGGGT
GCGTTTTTCT TCATGACCTA CCGTAGTTAT GTCGCCAGGA AACATAAACG CGAGCTCGAC
AAAGCCATCG AATACTTCGT CAATTCAGTC TATGGCGAAA ACTCTGTCGA TGAGATCTGC
TGGGACATTG CGCGGAACTG CTGCCTGCAA CTTCGCTTCG AGGATTGTAC CGTGTTTTTA
TGGGATGATG ACAAACAGAA ACTGGTTCGA AAGGCCTTGT ATGGCTCAAA AAACATCACC
GAAAATGAAA CTGTCGACCC ACTGGAACTA GAATTGGGAA TGGGAATCGT AGGAACCGCC
GGCAAAACGA AAAGAGCGAT CAACATTTCC GACACCTCCC GCGACCCTCG CTACATTGCC
ATGGACGCGA GCAAATTTTC GGAAGTAGCC GTACCCATCC TGCATGAAGG AAAGCTAATC
GGCGTGCTGG ATTCGGAACA TTCCGAAAAG AGATTCTTTA CCGAGGATCA TACCCGCGCG
CTTGTGACGA TTGCGTCCAT CAATGCCAAC AAAATAGCCG AAGCGCAGGC AGAAGCGGAG
GCGGCGAAAA AGGAGCTCAT GCTGCTGGAA ATTAACCGGA TGCTGGCGGA AAGTCAGCTA
ATGGCGCTGA GGGCGCAAAT GAACCCGCAT TTCGTATTCA ACTGCCTTAA CAGCATCCAG
GAATGCATTG TGACGCAGAA ATACGGCGAC GCCAGTAAGT ACCTCAACAA GTTTTCAAGA
CTATTCAGGA TGGTCCTTAA CAATTCCGAT AGGACCCTGG TGACCATCGA AGAGGAGAAA
GAAGTGCTGC AACTGTACCT CGAACTCGAA CAAATGCGGT TCGAACAGAG CTTCATCAGC
AGCATTGAAA TCGACGAAGA CCTTGAAGCC GACGACATTC TGCTCCCATC CATGCTCCTG
CAACCGTACG TTGAAAATGC AATCTGGCAC GGGCTCATGC ACAAGGAGGG CTACCGGGAA
CTGAAAATTG TGTTTTCCAA AATTGATGAA GATGTTTTCA AATGCATCAT CGAGGATAAT
GGCATCGGGC GCGAGAAGTC GCTGGAAATT AAACGGCGCA ATGCAGTTAC CAAACGGCAC
AAGTCGAAAG GCTTGCAAAT AGCAAAAGAC CGCCTCGACC TCATCGACCG CCAGGGGCAG
CACGCCTCGG TAAATATCAT CGACAAATAT GACGATGACG GCAATGCAAT GGGCACGATG
GTAGTCATCG AGCTTTCTAC TTCACTGGAC TATACCTGA
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| Protein sequence | MHRFQLFWLI VLFCPIVAEA QFVFQNLKEE DGLSAKDVRC LYKDADGFLW IGTGNGLNRF
DGHVIKAYQD VNSVSTIEVN GIHPIDGKAN LLVATSRGLK LFNKSTGKYR ADNRWKALAN
RPILSVKEDD QHRLWFICHK DIFIYDGKKV RKLAELLPWA ERVAHADLSF AARSAFCWDA
KRKGFWVGGY GCFFIDCANE TVYDSTHNPH RWPILNKRQV TAITMDNQYN LWYGSTVDFS
LHFSKPDLQS DTAYLHLDNV RSTDGVNCLF VDDQDRLWIS TWMYAAYVKE AGKPIRKIPY
SQDAGYSIAY GHFNGVIEDE EKDLWFATIN GLSKLTYNNP FEIVYKLPSR PFFLQVSFAA
INVIAARGDS ILAMKEDGLV LLKQNQQSFT HYTASKERVI KNRFFSCAFA NDTWWFGGNG
GLYFLRKGDK DIRKFSHPRI KPPLTASDIV VADNQGRIWF QIRTNAFYRY NPKTNECERF
NGTDSRYGRF NFKSCQSALT LRNGDVLFAM RGEGILRFSE QTQRFTVISV PDKDRFYAMQ
LMEETDGNLW MADRDRGLYK LNINGQYIDS LTPRNGLLTT PINSIARDNR GAIWVAGPGG
LSFFFPKTKK VTRVSINLGK TLQDYWNYVL TTPDHIYAAM LDHIVVIDPT KFTKIVVSKP
PHITSVKVLG KEVSDFLPAS LMLLADKDFI TLQFASLKHR DIPTLQYSYQ LKDIEERWVY
AGRNMTASYN SLPPGNYVFK VRSTDEHGRW MKEVSVLKIK ILPHWWESWW FLIVVGCVSG
AFFFMTYRSY VARKHKRELD KAIEYFVNSV YGENSVDEIC WDIARNCCLQ LRFEDCTVFL
WDDDKQKLVR KALYGSKNIT ENETVDPLEL ELGMGIVGTA GKTKRAINIS DTSRDPRYIA
MDASKFSEVA VPILHEGKLI GVLDSEHSEK RFFTEDHTRA LVTIASINAN KIAEAQAEAE
AAKKELMLLE INRMLAESQL MALRAQMNPH FVFNCLNSIQ ECIVTQKYGD ASKYLNKFSR
LFRMVLNNSD RTLVTIEEEK EVLQLYLELE QMRFEQSFIS SIEIDEDLEA DDILLPSMLL
QPYVENAIWH GLMHKEGYRE LKIVFSKIDE DVFKCIIEDN GIGREKSLEI KRRNAVTKRH
KSKGLQIAKD RLDLIDRQGQ HASVNIIDKY DDDGNAMGTM VVIELSTSLD YT
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