| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0140 |
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| Symbol | |
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| ID | 8223706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 153936 |
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| End bp | 156386 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644928019 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003084576 |
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| Protein GI | 255033955 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGAA ATTATTTCAA AATAGCGCTC CGCAGCATGT GGAAGCACAA AGGTTTTTCA
GTCCTGAACA TCACCGGGCT CGTCACCGGC ATTACCGCCT GCCTGATGAT CTTGCAATAC
GTGAGCTTCG AGCTCAGTTT CGACCGGTTC CATCAGGATT TCGACCGCAT TTACCGCATT
ACCAACGACC GTTTCCAGCA GGGCAAGCTC ATTCAGCATG GCACCATCAC CTACCCGGCC
GTCGCGGCGG CGATGGCGAA GGATTTCAAT GAGGTCGAAA CCTACACGAC GCTGGCTAAT
CCGGGCACAT TCAGCCTGCA AAAAGACCGG AAGATTTTCG AAGAAAAAGG CGTTTATACC
GACGGCCGTT TCCTCTCTGT TTTCACCTTC CCGCTCGTGG CCGGCAACCG CGCTACCGCA
TTGAAAGCGC CGCACTCGAT TATTATTTCG GAATCCAATG CACAGCGCAT TTTCAACGCT
TCCCCGGACG ACTACGCGGG CCTGATCGGG CAGACGATCA AGGTCGATAT CGACACTGAG
CCCTACCAAA TCACGGGCAT CATGAAGGAC TTCCCGGCGG CCTCGCATTT AAAGTACGGC
GCATTGATGT CCCTCGAAAC CCTCTCACTT ACGTGGGGCG AATGGATCAA AAACAGCTGG
GAGAGTTCCG ACGTGTGGCA TTACGCCAAG CTGCGGCCCG GCGCCGATGC GGCTGCGCTG
GAAAAAAAGT TTCCGGCATT CAGCAGCAGG TATTTCTGCG GCGACAAGGT TTCAGGCAGC
GTGGAGCAGT TTTTTCTCCA ACCACTCTGC GACGTGCATC TGGTTTCGGA TTATGAATAT
GAAATCGGTA AGGTAAACAA TGGGAAAGCC GTGTGGACGA TGCTCATCAT CGCAGCATTC
ATTCTGCTGA TCGCATGGAT CAACTATGTT AACCTCGCCA CGGCCCGCTC GCTCGAACGG
GCACGCGAGG TAGGCGTACG CAAGGTTGCC GGGGCAACGT CGGGCCAGCT GATCGGGCAA
TTCCTGTCCG AATCGGTCTT ACTGAATGTG CTCGCGCTGG CGCTCGGCAT TGGATTGGCC
GTGGTGCTGC AACCGGTTTT AAACAATGTA ATTGGAAAAC CGCTCTCGTT TGCATTGCTG
GTGGGTGCAG GTTATGGCGG AAAAAACTTC GCATTAATGC TGGGCGGCGT GTTTTTGCTG
GGCATCCTGC TGTCGGGCTG CTATCCGGCC TTTGCGCTGA CGTCCTTCAA GGCCGTGCAG
GTGCTGAAAG GTTCGTTCAA GCGCTCGGCC AAAGGCGCGT GGGTGCGGCA GTCGCTCGTG
GTATTTCAAT ATACGGCATC AATGGTGCTT ATTGTAGGCA CTTTCATTGT ATTTAAACAA
CTGAAATTCA TGCGGGAAGG CAACCTGGGC TTCAATATGG ACCAGGTACT CGTGATCCGC
GGCCCGCAGC TCACACTCTG GGATTCGACT TCGATTGACC GTATCAACAG CTTCAAAACT
GAGCTTGAAC GCATTCCTGC GGTGCAATCG GCGACGGCGT CGGGCAATGT GTTCGGCAAC
AAGCTGGGAC GTAGTTTCAA TGTCAAAAGG CTGGGTTCCG GCGATCAGAA AGGCGTAACC
TTCGCCCGGA TGCCTGTCGA CGGCGACTTT TTTGATACCT ACAAAATTCC AATCATTGCG
GGCCGCAACT TCCTTCGCAC CGACTCGAAC CAGGATCCCC GAAAAGTGAC CAACGCAATC
CTGAACGAAT CGGCTGCCAG ATTGCTGGGA TTTCCCAATG CCCCGGAAGC TACCGGGCAA
AAGTTTGTGA TGCAAGGGAA AGAATGGGAG ATTATCGGCG TCGTGGCCGA TTTTCACCAG
CAATCCCTTA AACACAGCAT TGAACCGATC GTATTCGCTC CATTTTACAG TCTGGCGGGG
TACTTTTCCA TGAAAATCAA CGCAGCCGAC CCGGCGCGCA GCATTGCAAC CGTGCGCGAG
CAGTACAACG CATTTTTCCC CGGCAATAAT TTCGACTATT TCTTTATGGA TGAGCGCTTT
AATGAGCAAT ACAGAGACGA TCAGGTTTTC GGCAAAGTTT CGAGTTTTTT CTCGCTGCTG
GCCGTGCTGA TCGCTTCGCT GGGCATATTC GGACTATCAT CCTATACGAT CACCCAGAGG
ACTAAGGAAA TCGGCGTCCG CAAAGTCCTT GGCGCGTCCA CATCCGGTAT TGTATCCTTG
CTTTCGAAGG ATTTTCTCAA ACTGGTGCTC TTCGCGATCG TTATCGGCGC GCCTATTGCC
TGGTACGGCG TCGATCAGTG GCTGAGTGAC TTCGCTTACC GCATTCATAT CGAATGGTGG
ATGTTTATGA TCGCTGCGGC GGTATCGCTG CTGATCGCAT TTGCCTCCGT CAGCTTCCAG
AGTGTACGCG CGGCATTGAT GGACCCGGTG AAAAGCCTGC GGAATGAGTG A
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| Protein sequence | MIRNYFKIAL RSMWKHKGFS VLNITGLVTG ITACLMILQY VSFELSFDRF HQDFDRIYRI
TNDRFQQGKL IQHGTITYPA VAAAMAKDFN EVETYTTLAN PGTFSLQKDR KIFEEKGVYT
DGRFLSVFTF PLVAGNRATA LKAPHSIIIS ESNAQRIFNA SPDDYAGLIG QTIKVDIDTE
PYQITGIMKD FPAASHLKYG ALMSLETLSL TWGEWIKNSW ESSDVWHYAK LRPGADAAAL
EKKFPAFSSR YFCGDKVSGS VEQFFLQPLC DVHLVSDYEY EIGKVNNGKA VWTMLIIAAF
ILLIAWINYV NLATARSLER AREVGVRKVA GATSGQLIGQ FLSESVLLNV LALALGIGLA
VVLQPVLNNV IGKPLSFALL VGAGYGGKNF ALMLGGVFLL GILLSGCYPA FALTSFKAVQ
VLKGSFKRSA KGAWVRQSLV VFQYTASMVL IVGTFIVFKQ LKFMREGNLG FNMDQVLVIR
GPQLTLWDST SIDRINSFKT ELERIPAVQS ATASGNVFGN KLGRSFNVKR LGSGDQKGVT
FARMPVDGDF FDTYKIPIIA GRNFLRTDSN QDPRKVTNAI LNESAARLLG FPNAPEATGQ
KFVMQGKEWE IIGVVADFHQ QSLKHSIEPI VFAPFYSLAG YFSMKINAAD PARSIATVRE
QYNAFFPGNN FDYFFMDERF NEQYRDDQVF GKVSSFFSLL AVLIASLGIF GLSSYTITQR
TKEIGVRKVL GASTSGIVSL LSKDFLKLVL FAIVIGAPIA WYGVDQWLSD FAYRIHIEWW
MFMIAAAVSL LIAFASVSFQ SVRAALMDPV KSLRNE
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