Gene Dfer_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0124 
Symbol 
ID8223690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp141288 
End bp142067 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content52% 
IMG OID644928003 
Producthypothetical protein 
Protein accessionYP_003084560 
Protein GI255033939 
COG category[R] General function prediction only 
COG ID[COG3541] Predicted nucleotidyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.045429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.214257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG AAATCCAGCA AGAACTGTCC CGCCTCGAAT CCCAGCACGA CATCAAAATC 
CTCTATGCCG TTGAGAGCGG GAGCCGGGCT TGGAGGTTCG CTTCGGTGAA TAGCGATTGG
GATGTGCGGT ACATTTATGT GCACCGACCG GAGTGGTATT TGCAGATCGA CGACAAAAAG
GATAATCAGG AGGAGATTTT GCCGAACGAC ATCGACTTGG CCGGCTGGGA GTTGCGGAAG
GCATTGCGGC TTTTCAGGAA ATCGAACCCG CCCATGCTCG AATGGCTCGA TAGTCCGATC
GTTTACCGCG AGCAGTTTTC TACGGCCGCG AAGCTGAGGG CGTTGAAGCA GCAGTATTTC
AGTCCGCGTT CCTGCCTACA CCATTACCTC AGCATGGCGG AGGAGAATTA CAAGGATTAC
CTGCTCAAAG ACATGGTGCG GGTGAAAAAA TATTTCTACG TATTGCGCCC GATCCTCGCG
TGCGACTGGA TACGCGAAAC GGACACCATG GCGCCAACCG AGTTTATAAA ACTCCTCGAC
AGCCAGGTAC ATGATGACCG TTTGCGAAGC GAAATCGACA GTTTGCTAAT CAGAAAATCA
TCCGGCGAAG AACTCAGTGA GGAGCCACGC ATTCCCTTGT TGCACGATTT TCTGACAGGG
CGGATCGCCT TCTTCAAAGA GTATGTCAAA GACCTCCCGT CACCGACATT ACCTGACACG
GCTTCATTGA ACTCCCTCTT CCGGGAAACC CTTGCGGAAG TGTGGAATTT CGACTGCTAA
 
Protein sequence
MTTEIQQELS RLESQHDIKI LYAVESGSRA WRFASVNSDW DVRYIYVHRP EWYLQIDDKK 
DNQEEILPND IDLAGWELRK ALRLFRKSNP PMLEWLDSPI VYREQFSTAA KLRALKQQYF
SPRSCLHHYL SMAEENYKDY LLKDMVRVKK YFYVLRPILA CDWIRETDTM APTEFIKLLD
SQVHDDRLRS EIDSLLIRKS SGEELSEEPR IPLLHDFLTG RIAFFKEYVK DLPSPTLPDT
ASLNSLFRET LAEVWNFDC