Gene Dfer_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0106 
Symbol 
ID8223672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp122661 
End bp123008 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content56% 
IMG OID644927985 
Productprotein of unknown function DUF488 
Protein accessionYP_003084542 
Protein GI255033921 
COG category[S] Function unknown 
COG ID[COG3189] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.480483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.815446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTTA AAACAAAGCG GATTTATGAC CCGGCAGCGG CCACAGATGG CTACCGTGTG 
CTGGTAGACC GCCTGTGGCC GCGCGGTTTA ACGAAAGAAG CGGCTCACAT CGACCGCTGG
ATGAAGGAAG TGGCTCCCTC CGACGAGCTC CGCAAGTGGT TCCATGCCAA TATGGACGAA
TGGGACGAGT TTACGGCTCG TTTCACCGCC GAAATCGAAG GATCGGAGGC TCTGCAAGAG
TTGAAGACCC TGGCTGCCGA AAACGAGACG CTTACGCTGC TGTTTTCGGC CAGGACAACG
GATCGCAACC AGGCGCTCGT CCTGAAAGAG CTTCTGGAAA AAGCCTGA
 
Protein sequence
MNVKTKRIYD PAAATDGYRV LVDRLWPRGL TKEAAHIDRW MKEVAPSDEL RKWFHANMDE 
WDEFTARFTA EIEGSEALQE LKTLAAENET LTLLFSARTT DRNQALVLKE LLEKA