Gene Dfer_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0105 
Symbol 
ID8223671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp121240 
End bp122448 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content49% 
IMG OID644927984 
Producthypothetical protein 
Protein accessionYP_003084541 
Protein GI255033920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.397439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.982214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGGA TCGCATTTTT GTCGGGCCTG CTCCTCATGT GCCTGACACT TTTCCGCCAG 
GATTTTTTCG TCAGGCATTC CACTATTTTC CCCGTTTACT TTTTTCTGTT CCCGATTGGC
CTCGTCATCA TGCTCTGGTC GTTTTGCAAT GGCAAAAAGA AACGGCTGGT CATTCTGCTG
GGCATTTTCA CTGTCATGGA AATAGCATTG GCAGGAAGCG TGTGGTATAT GGCCGCATTT
CAAAAGTATG CGCCTTTTTC GGACAGCTAT TATTACTGGA TAAGGCAGCA ATATGCGGGT
TCATTTAAAA ACACGACCAA TTTCAACTCC GAGCTCTCGC GATACGATTC GCTGCTTACT
TACCGGTTCC GGCCGCAAAT CACGGGCCGG TTCACCAACC CGGAATTCGA TGTGGAAGTT
AAAACGAATT CTGCCGGTGT GCGCGACGAC GAAGCCAGCT TGCGCCATCC TAAAATCGTC
GTGCTGGGCG ACTCCCATGC CATGGGCTGG GGCGTGGAGC ACGAAGAGCG TTTCTCGGAA
GTGATTGAAA AACAACTCAA AATCAATGTA TTGAATACCG GCGTGACCTC CTACGGCACC
TACCGCGAAA CCAAACTCCT CAACGAGCTG AACCTGGACT CCTGCAAACT GCTCATCATC
CAATATTGTG ACAACGACCT CGACGAAAAC AAAGCAAACC TCGTAAAAGA CCAGAAATCG
AGCATCGACG CGTTCGGGTT TGAGGTGGCT GAAAAGCAGA ATACGATCAG CAAAATCTAT
TTTCCATTCA AAGGCATTTA CATAACCATT CGCTGGCTGA TTGCCGAGGC GCTGAAAAAG
TCCCCCGCCC CGGCTGCCAT TGCCGCGGAC GTCAAAACCG GCAGCCTAAT ACGTCAGCCA
GAACATGCAC AAGCCTTTTT TCCCTACCTG AACCGGATCC GGGAACGGTA TCATGGCCCG
ATCGTCGTTT TCGACCTTGG GGTGTATAAT TTCCCGATCG TGAAGGAATT CCAGACGTAC
CAGGCGCACC ATCCGATGGA GAATGTGCAT TTCATCAATA TCCATCCACT TCTCGATACA
AAATACTATT TTACCATCGA CGACCACATC AACGCGCGCG GGCACAGGAA AATCGGTGAA
GCGTTAGCTA CATTTATACG CACAAACGGG TGGATGAATA AGCAATCAAC CAAACTTCAA
AGGCCATGA
 
Protein sequence
MNWIAFLSGL LLMCLTLFRQ DFFVRHSTIF PVYFFLFPIG LVIMLWSFCN GKKKRLVILL 
GIFTVMEIAL AGSVWYMAAF QKYAPFSDSY YYWIRQQYAG SFKNTTNFNS ELSRYDSLLT
YRFRPQITGR FTNPEFDVEV KTNSAGVRDD EASLRHPKIV VLGDSHAMGW GVEHEERFSE
VIEKQLKINV LNTGVTSYGT YRETKLLNEL NLDSCKLLII QYCDNDLDEN KANLVKDQKS
SIDAFGFEVA EKQNTISKIY FPFKGIYITI RWLIAEALKK SPAPAAIAAD VKTGSLIRQP
EHAQAFFPYL NRIRERYHGP IVVFDLGVYN FPIVKEFQTY QAHHPMENVH FINIHPLLDT
KYYFTIDDHI NARGHRKIGE ALATFIRTNG WMNKQSTKLQ RP