| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0083 |
|---|
| Symbol | |
|---|
| ID | 8223649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 99034 |
|---|
| End bp | 99603 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644927962 |
|---|
| Product | methionine-R-sulfoxide reductase |
|---|
| Protein accession | YP_003084519 |
|---|
| Protein GI | 255033898 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.532406 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATT TCATAATGGC CGCCATTGCC GGAGTGTTCG CCCTCACGCT GCAAAACTGC
TACGGGCAGT CCTCGGCCGA CCAGAGCAAA CCGGCCCAGA AAGCACCCGA ATATTCGCGT
ACTGAAACCG CACCCGTCAA AAAAAGCAAC GACGAGTGGC AGAAGATACT CTCGCCCGAA
GTGTACCGCG TGGCGCGCCT CAAGGGCACC GAACGCCCAT TCACGAGCGA GTATGAGCAT
TCCAAAGAAA TCGGCACATT CTACTGCGCC GTGTGCGGTA ACCCGCTGTT CAAGAGCGAT
GCCAAATACG AAAGCGGCTG CGGCTGGCCG AGCTTCTTCG AGCCGATCAG CAAGAAGTCC
ATTGTGGAAG CGGCGGATAA TAGCCTGGGA ATGCACCGCA TTGAGGTGAT GTGTGGCCGC
TGCAAATCGC ATTTAGGCCA CGTATTCGAC GACGGCCCAC CTCCTACCGG CCTCCGCTAT
TGTATTAATG GCGTTGTGCT GGATTTTGAA AAAGCTAAAA CTGCCGAGAA GAAATTCAAT
AGCAAAAAGA AAACCCAAAC CGGTAGCTAA
|
|---|
| Protein sequence | MKNFIMAAIA GVFALTLQNC YGQSSADQSK PAQKAPEYSR TETAPVKKSN DEWQKILSPE
VYRVARLKGT ERPFTSEYEH SKEIGTFYCA VCGNPLFKSD AKYESGCGWP SFFEPISKKS
IVEAADNSLG MHRIEVMCGR CKSHLGHVFD DGPPPTGLRY CINGVVLDFE KAKTAEKKFN
SKKKTQTGS
|
|---|
| |