Gene Dfer_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0075 
Symbol 
ID8223641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp92461 
End bp93132 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content54% 
IMG OID644927954 
Productprotein of unknown function DUF1361 
Protein accessionYP_003084511 
Protein GI255033890 
COG category[S] Function unknown 
COG ID[COG4330] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.69522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGGTT TGTTCTCGCT GCTGCTGCTT TTGCTTTTAA GCTTGCTTGC GGTGTTTTTC 
CACCTTGTCC GCATCCTCTT CAATTCTCCG GTTGATTTTT CGCTCGACTG GAACCTCTTT
CTGAGCTGGA TACCGCTCAT TATCGCTTTC CTCGCGGATA ACCTCACCAA GCGTTTCGGG
CATATACCCG TTGTGCTGGG CATTCTCAGC ATCGCGTGGC TAGCATTCTT TCCCAATGCG
CCTTATATGA TCACCGACCT GGCCCACCTC ACGGTGGACT ACCAGCGGGA CCTCACCTGG
CACGACATCA TCATGCTGTT CTCGTACGCG GAAGTGAGCC TGTTCAATGG CCTGGTGTCG
CTCTACTGGA TTCACCGCTC CTGGCGCAGG GTGTTCGAGC GAAAAGCTGC TAACACATTG
CTGCTCGTGA GCTTACCGCT GGCGGGTTTC GGGGTATACC TTGGCCGCGT GCGGCGTATG
AACAGCTGGG ATATTATCCA TGAACCGCAG GCGATCATCA ACAGTGTTTT CGAAAGCCTC
CTCGACCGTA CCGCGTGGGT ACTTTCGATG GAAATCGGGA TGCTGCTGGG GATACTCTAC
CTCGTCCTCT GGGGCGTAAT CCGCTTCCGG ATCCGGCATT CGAAAAAGAA TACCGAATCG
GGAAACCAAT AA
 
Protein sequence
MEGLFSLLLL LLLSLLAVFF HLVRILFNSP VDFSLDWNLF LSWIPLIIAF LADNLTKRFG 
HIPVVLGILS IAWLAFFPNA PYMITDLAHL TVDYQRDLTW HDIIMLFSYA EVSLFNGLVS
LYWIHRSWRR VFERKAANTL LLVSLPLAGF GVYLGRVRRM NSWDIIHEPQ AIINSVFESL
LDRTAWVLSM EIGMLLGILY LVLWGVIRFR IRHSKKNTES GNQ