Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0065 |
Symbol | |
ID | 8223631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 79753 |
End bp | 82140 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644927944 |
Product | capsular exopolysaccharide family |
Protein accession | YP_003084501 |
Protein GI | 255033880 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0489] ATPases involved in chromosome partitioning |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.121556 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGATT TAACAACTAA CGAGGGTATG AACCCAATGT TCCAGGAGGA AGAACAAGAG TTCAACCTGA ACGAATACCT TAGAAGATAC TACCGCTACT GGTATCTTTT CCCCGTATTT ATCTGCATCG CTTTCATCGC AGCGTTCTTT TATCTGCAGA CTACATCACC TGTATATAAT ACCAAAACCA GTATTTTGAT CAAGGATGAG AAAAAAGGTC TGAGCGGATC GCAGGGCGAT ATCCTTTCCG AACTGAGCAC TCAGTTCGGA GGCAACAAGC TTGTTGAAAA TGAATTAGAG ATTATAAAAT CTAAAACACT AATGGAGCAG GTCATCAAGG AGCTCTCGTT AGACGTTTCA TATTCAACGC GCGATGGACT GAGAACCGTT TCTCTTTATA AACGGAGCCC GGTAGTTGTT AAGCCTGAAG TAATAACTGA GTTCGCGCTG AAAGAACCTT TGGTTGTACA TGTTGTTGAT GAAAATCACT TCAGATTTAA TAATGAGGAG AAAGTGTTCA GTTTCAATCA AAGGTTCGCG AATGCTTGGG GAGCTTTTGT TGTGTTGAAG GGGCCAAAGT CCACCTACGA CAAAGTTACT GTGACTTTCA AAGACACTAA GAACCTGACA GAAGGCATGC TGAGCCGATT GACCGTAGAA CAGCCGAACA CGAAAAGCAC TGTGCTTGAA ATCAGCTATG AAGACGTCGA TACGCAGCGT TCGAAAGATG TATTAAATAA GCTTCTGGAT GTTTATGTAC AATCATCACT TGGAGACAAA AACAGCGAAG CAAGCAATAC GCTTAAATTT ATAGAAAACA GGTTGGGCCT TATCACGGGC GAGCTTGGAG ATGTTGAAAA GGATGTCGAG TCGTATAAGA GAACGCAGGG GATTACTGAC ATTGGTACAG AATCCAAGCT TTTCCTGGAA AATATTAAAG AAAACGACTC GAAACTTAAT GAGGTGAATA CTCAGATAAG CATTTTGGAG AGCGTCGAGA ACTACATACA GAACGCCGGG GAAGGTGCTG TTGCGCCGGC GACTTATATG ATCAATGATC CCGTCCTGGT ATCGTTGTTG ACCAAATTTA ATGATCTGGA GTTGCAGCGC GAGCGATATG CGCGTACTAC TTCTCCCAAC AACCCGCTAT TGCAAACTAT TAACACCCAG CTAGCGGGTA CTCGCCAGTC AATCAGAGAA AACGTACAAA ACCTGAAAAG GGGGATGGCG GTAACCAAGC GCAATCTGGA AGGTATCAAT ACAAGATTTT CCGCCGGCTT GCAAAGCATC CCCAAAAAAG AACGCGAATT TGTCGGCATC AAGAGACAAC AGTCTATCAA AGAAGAGCTG TACCTGTACT TGCTTCAGAA GCGCGAAGAA ACTGCATTGG CCTATGCTTC TACCGTAACA GATAGCCGCC TAATCGATGC TCCTATTTCC AGCTTTAATC CGATTAAGCC TAAGCCATCG CTTGTATGGC TAGGTTCGGC ACTGGTAGGA ATTTTACTTC CAGTATTGCT AATCAATTTC CTCTTTATGA TTAACAATAC CATACAGTCT CGAGAAGAGA TCGAAAAGGT CACTCATTCT TCAATCCTGG GTGAGATCGG GCAGATGAAG GGTACTGTAA ACGGTGTTCC AGGTGAAGAG TCGATTATAA AAATGACCAG CCGCAGCGCT GTGGCTGAAC AATTCAGAGC TCTTAGAACC AACTTGCAAT ATCTTGGAGA TGGCACGTGT AGGGTGATTA TGTTTACATC TTCGATTGGT GGGGAAGGAA AAAGTTTCGT AAGTATTAAC CTGGCAGCCA GTCTCGCTTA CTCGGATAAA CGCGTACTGC TCATAGGCCT CGATTTGCGG AAACCTACGC TACATGAGCG TTTGGGTGTG CCTAACCGTT TCGGTGCCTC AAACAGCCTC ATCGGCCAGG GTAACTACGA GGATTTCATT CAGTCGACAG GCGTGCATCC GAAGTTTGAT GTACTCACAA GTGGTCCTAT TCCTCCCAAC CCATCAGAGT TGTTGAGTAA TGGAAAGCTA CCTGTACTGC TCGAAGAACT ACGGCATAAA TATGACTATA TCCTGATTGA TTCGCCTCCG TACGGATTGG TTACAGATTC GGCCTTGATC GCTGAGCATG TTGACGCGAC ACTCTATCTG GTTCGTTTTA ACTACACCAT CCATGACCAT CTTAAACGCA TCGGAGACTT GCAACGGGCT CGTCGCTTTA ACAACCTTTC CGTCATCTTC AATGGTGTGA ACTACGGTGC CGGATATGGT TACGGATACG GTTATGGGGG ATATGGTTAC GGCTACTATT CGGAAGAACT GGAAGGAGGT TCGAAATCTG TCGGTTCCCG TCTGAAAAAG CTGGTAGGCA AAGTTTAA
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Protein sequence | MKDLTTNEGM NPMFQEEEQE FNLNEYLRRY YRYWYLFPVF ICIAFIAAFF YLQTTSPVYN TKTSILIKDE KKGLSGSQGD ILSELSTQFG GNKLVENELE IIKSKTLMEQ VIKELSLDVS YSTRDGLRTV SLYKRSPVVV KPEVITEFAL KEPLVVHVVD ENHFRFNNEE KVFSFNQRFA NAWGAFVVLK GPKSTYDKVT VTFKDTKNLT EGMLSRLTVE QPNTKSTVLE ISYEDVDTQR SKDVLNKLLD VYVQSSLGDK NSEASNTLKF IENRLGLITG ELGDVEKDVE SYKRTQGITD IGTESKLFLE NIKENDSKLN EVNTQISILE SVENYIQNAG EGAVAPATYM INDPVLVSLL TKFNDLELQR ERYARTTSPN NPLLQTINTQ LAGTRQSIRE NVQNLKRGMA VTKRNLEGIN TRFSAGLQSI PKKEREFVGI KRQQSIKEEL YLYLLQKREE TALAYASTVT DSRLIDAPIS SFNPIKPKPS LVWLGSALVG ILLPVLLINF LFMINNTIQS REEIEKVTHS SILGEIGQMK GTVNGVPGEE SIIKMTSRSA VAEQFRALRT NLQYLGDGTC RVIMFTSSIG GEGKSFVSIN LAASLAYSDK RVLLIGLDLR KPTLHERLGV PNRFGASNSL IGQGNYEDFI QSTGVHPKFD VLTSGPIPPN PSELLSNGKL PVLLEELRHK YDYILIDSPP YGLVTDSALI AEHVDATLYL VRFNYTIHDH LKRIGDLQRA RRFNNLSVIF NGVNYGAGYG YGYGYGGYGY GYYSEELEGG SKSVGSRLKK LVGKV
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