Gene Dfer_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0055 
Symbol 
ID8223621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp68514 
End bp69011 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content45% 
IMG OID644927935 
Producttransferase hexapeptide repeat containing protein 
Protein accessionYP_003084492 
Protein GI255033871 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.463535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TATATTTGTT ATATCTAAGG CTCTTCAACC CGGTAAAGTG GGCAAGAGAG 
CTAGGCGCGA CGGTGGGAGA AAGATGCAGG TTTTACAAAA TCTCTTTCAG CACCGAACCC
TACCTTGTAA AGATCGGTAA CCACGTCTCA GCCACAAAGG TCCATTTTGA GACGCATGAT
GGAGGGGTTT GGATATTCAG GGATCAGCAT CCGACTTGGG ATATCATCAA GACTGTTACG
ATAGGCGACA ACGTTTACCT CGGCTACGGA ACCATCATTT TGCCTGGCGT AACAATCGGA
GACAATGTGG TCGTGGGTGC TATGTCAGTA GTCACGAAAG ACATCCCTTC TAACTCCGTT
GCTGTGGGCA TACCTGCACG CGTGATTAAA ACCACCGATG AATACTATCA AAAGATTCAA
AAGGATGTTC GCGAAACCAA GAAAATGAGC GCTGACCAAA AGGCTGCCTA TTATAAAAAA
ATGTACTCAG CTTTGTAA
 
Protein sequence
MKKIYLLYLR LFNPVKWARE LGATVGERCR FYKISFSTEP YLVKIGNHVS ATKVHFETHD 
GGVWIFRDQH PTWDIIKTVT IGDNVYLGYG TIILPGVTIG DNVVVGAMSV VTKDIPSNSV
AVGIPARVIK TTDEYYQKIQ KDVRETKKMS ADQKAAYYKK MYSAL