Gene Dfer_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0053 
Symbol 
ID8223619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp66330 
End bp67436 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content44% 
IMG OID644927933 
Productglycosyl transferase group 1 
Protein accessionYP_003084490 
Protein GI255033869 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.933113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.359043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA TTGTCACGGG AACACGTGGT ATTCCAAATA TTCAAGGCGG GGTTGAAACG 
CATTGCCAGG AAATTTTTCC TTTAATAGCA GACGCTGGCG CCGGGCACGA TGTCACAATT
ATCAGAAGAA GCGGCTTTGT AGATCCGACC AATGATATCT CAGAATATCA GGGAGTGAAG
ATCGTTACTT TATTTTCTCC CAGGAGCAAA TCGCTGGAAG CTTTCTTGCA TACTTTTCTG
TCGGTTGTTT ATGCGGCGTG GAAACGGCCT GACATTCTGC ATATACATGC GGTAGGCCCG
TCAATCATGA CGCCTTTCGC ACGCTTGCTC GGGCTGAACG TAGTGATGAC CCATCATGGC
CCTGACTACG AAAGGAAAAA ATGGGGCAAT CTGGCAAAGA AAGTTTTACA GCTTGGCGAA
CAAGCTGGTG TTCGTTACGC AAATAAGGTG ATCGTAATTT CAGAGGGAAT TGGTTCTCTT
ATCGAAAGGA AATATAATCG TAGTGACTTT GTTCTGATTC CTAACGGAGT GCCCACAGCA
AATAAAAATC AGGAAACGGA TTACCTGGAA AGTCTGGGTC TGAAAAAGGG CAAGTACATA
TTTACATTGG GCCGCTTCGT ACCTGAAAAA GGTTTCGACT ACCTAATTCA AGCCTACTTG
CAATCAAATG TGAGTAACGA TTATAAGCTA GTGATAGCAG GAGATGCAGA TCATGAGTCA
CCATACTCAT CGACCCTGAA AGATACAGCC AGGAAAAATG GAATTGTTTT AACTGGGTTT
ATCAAAGGAG AAAAACTTTA CCAATTGTAT ACATCCGCCC GCCTGTTTAT TCTACCCTCA
TTCTATGAAG GCCTCCCGAT TTCCTTATTG GAGGCAATGA GTTACCAACT AGATATTCTG
GCTAGCGATA TCGACGCCAA TAAAGAAGTT TGCCTTCCCC AAGATTTCTA TTTCGAAGTA
GGAAATATCG ACAGTTTAGC CAAAAAGATA CGCGAAAAGA TATCGAATCA TTCACCCTTA
CAGAACTACG ATATGAGCAG GTATGACTGG GCACAAATAG CTCGGCAAAC TTTGGAAGTG
TACGAACGCG CCTGCGGTAA ACGGTAG
 
Protein sequence
MKIIVTGTRG IPNIQGGVET HCQEIFPLIA DAGAGHDVTI IRRSGFVDPT NDISEYQGVK 
IVTLFSPRSK SLEAFLHTFL SVVYAAWKRP DILHIHAVGP SIMTPFARLL GLNVVMTHHG
PDYERKKWGN LAKKVLQLGE QAGVRYANKV IVISEGIGSL IERKYNRSDF VLIPNGVPTA
NKNQETDYLE SLGLKKGKYI FTLGRFVPEK GFDYLIQAYL QSNVSNDYKL VIAGDADHES
PYSSTLKDTA RKNGIVLTGF IKGEKLYQLY TSARLFILPS FYEGLPISLL EAMSYQLDIL
ASDIDANKEV CLPQDFYFEV GNIDSLAKKI REKISNHSPL QNYDMSRYDW AQIARQTLEV
YERACGKR