| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0046 |
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| Symbol | |
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| ID | 8223612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 52000 |
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| End bp | 53370 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644927926 |
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| Product | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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| Protein accession | YP_003084483 |
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| Protein GI | 255033862 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.541693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACC ATTATCCAGG CCTCCTGCCC AAGGTACATC TGTGGTTGGA CGTCGCTCTC
CTCAACTTAT GCTTCTTCGT TGCCTACCTG CTCCGGTTCG ATAATGTAGA CGGCTTTCTG
GAAAATGAGT ACATCAATTT GCTTCTGGTA GCAAACCTCG TTTGGATCTT CACGATCCAC
ATCTTCAAAA CATATCTTTT TACACGGCTT TCTTATCATT TTAATACGCA GCTGGCCGCC
TTTCTCAAAG CGGTGACGGT ACATGCGGCA GTGATTACTG CATTTCTATA TTTGACTAAG
CAGGGGGAAG ACTATTCGCG GTACCAATTC CTGATGACGT ATTGCTTCTT CGTGGCGACA
TCGACCCTCA GCAGGGCCGC CGTGGTGATC TTCCTCAAAA TGTACCGCCA GGCAGGATAC
AATTTTAATC GTTATGCGAT TGTTGGCAGA GGGGAACTGG CCCAGCTTAT AAGAGAATTC
TACAACGACC GTAAAGAGCT TGGCTATCGC TACTACGGAA TGTTACAACC AAGCGAGCAT
TCCGGCAGTG GTATCGACGA AATTGAGTCA TTGGTCAAAG GCAAGCAGCT CGACTACCTA
TACTGTTGTC TGTCCGAAAT GACGGATGAG CAGGTTAGAG AGGTGATCAA AATGGGCGAA
CGCCAACGCA CCCAAATCCG CCTCGTCCCC GACTTCCGTG GCTTTGTAAC CAACATGGCG
ACCATCGAGT ACCACGATAT GTATCCGATT ATTCAGATCA ACACCAAGCC TTTTTCCAGC
TTGAATGAGC AAACGGTTAA AAGAGCTTTC GACCTGATAT TCTCCGTCAT CGTCATGATC
CTCGGCGCGC CGGTGTTCTT CCTGGTTTGG GCAGCCATTA AAATATCCTC GCCGGGTCCC
GTGTTTTTCA AACAGCAGCG CTCGGGTCGC TGGGGCGAAC TGTTCTACAT TTACAAATTC
CGCAGCATGC GCGTAGATGC AGATAAAATG GGATTGCAGC ATTCCAAGGG CGACGACGAT
CCGCGCATCA CGCCGATTGG CCGTATCCTT CGCAAATCCC GTCTTGACGA GCTTCCGCAG
TTTATAAACG TGCTGAAAGG CGAAATGTCG GTGGTAGGAC CGCGTCCATT GTACAAGTAC
GACGTGGACA TGCTGATGGA AGCCGCTCCG CACGATTTTC AGCGCCTGCT GACTGTTAAA
CCGGGCATTA CATCCATCGG CCAGATCAAT GTGGGCTATG CCGACACCGT GGCCAAAAAC
GTAGAGCGGC TCAAATACGA TCTTCAATAC CTTAAATCAT ATAGTGTTTT TGATGATGTT
CAGCTCATAT TCAGGACCGT ACAGGTGATG GTTCTCGGAC GCGGGCAGTA A
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| Protein sequence | MKNHYPGLLP KVHLWLDVAL LNLCFFVAYL LRFDNVDGFL ENEYINLLLV ANLVWIFTIH
IFKTYLFTRL SYHFNTQLAA FLKAVTVHAA VITAFLYLTK QGEDYSRYQF LMTYCFFVAT
STLSRAAVVI FLKMYRQAGY NFNRYAIVGR GELAQLIREF YNDRKELGYR YYGMLQPSEH
SGSGIDEIES LVKGKQLDYL YCCLSEMTDE QVREVIKMGE RQRTQIRLVP DFRGFVTNMA
TIEYHDMYPI IQINTKPFSS LNEQTVKRAF DLIFSVIVMI LGAPVFFLVW AAIKISSPGP
VFFKQQRSGR WGELFYIYKF RSMRVDADKM GLQHSKGDDD PRITPIGRIL RKSRLDELPQ
FINVLKGEMS VVGPRPLYKY DVDMLMEAAP HDFQRLLTVK PGITSIGQIN VGYADTVAKN
VERLKYDLQY LKSYSVFDDV QLIFRTVQVM VLGRGQ
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