| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0042 |
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| Symbol | |
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| ID | 8223608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 47140 |
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| End bp | 48504 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644927922 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003084479 |
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| Protein GI | 255033858 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.293166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTATT GGTCTAAGCC ACAAAAAACG ACGCGTTTGG CGCTTAGCTC GGCATTCCTT
TTTTTGAATT TTATCGGTTC CGCCCTCGCG CAGGGTATTC AGGAAAGTAG CCGGGAAGCG
CCGGTGTTAG AGCAGGCAAC GTTACAGGAC GTGGTTGCCT ATGCCATCAA AAACCAGCCA
GCGATCCAGC AATCGCTGAT CGACGAGCAG ATCACCGCCA ACCAGGTCCG CGCCAAACTG
GCCGACTGGT ACCCGCAGAT CAACTTTAAT TACAATTTGC AGCACAACTT CATCGTACAG
ACGAGCATTA TCGCCGGAAA CCCGGTAAAA CTGGGGGTTA ACAACATTTC GGCGGCGCAG
TTCACGCTCT CGCAGCAGAT TTTCAACCGC GACGTGCTCC TGGCGAAACG TACCCGCGGC
GACGTGCTTT TCGCGGCCAG CCAAAACACC GTGAACAACA AAACGGACCT GGCTGTGGAT
GTTTCGAAGG CATTTTACGA CGTGCTCGCA ACCACGCAGC AAATCAAGGT AGCCGATGAA
GATATTGTAC GCCTCGAACG CAGCCTCAGA GATGCCGAAA ACCAGTACAA GTCCGGCATT
ACCGACAAGA TCGACTTCAA AAGGGCGACC ATTTCGCTCA ACAACACGCG TGCGAACAGG
AAAAGCAACG ACGAAGTGTT GAAGGCCAAA TTGGAATACC TGAAAACGCT GATGGGCTAT
CCGCTGAACA AAGCGCTGGA AATCAGCTAT GATACCCTGC AAATGGAACG CGAGATCGCG
CTCGACACGA TGCAGAATGT GGACCTGAAC GCGCGCATCG AATACCAGAT CCTCGCGACG
CAGAAAAAAC TCGCGGAAGC CAATTTGCAA TACAATAAAT GGAGCTACCT GCCGAATCTT
TCGCTGAACG GCGCCTACAA CCTCAACTTC CAGAACAACC AGTTTTCGGA CCTTTATAAC
AAGAATTATC CGAACTCCTT CGGCTTGCTG ACGCTCTCGC TACCCATTTT CCAGGGCGGT
AAACGCAAGG CCAACACGAA GCAGGCCGAA TGGGCCCTCA AACGCCTCGA CTGGGATTTG
AAAGGACTGC AAAACAATGT CAACTCGGAA TATGCGGCTG CATTGGCCAA TTACAAGGGC
AACCTCACGA ACCTGCTCGC GCAGAAAGAA AATGTGGAGC TGGCCCGCGA GGTGTATGAC
GTAATCCAGC TGCAATACAA ATCGGGCATT AAAACCTACC TCGAAGTGGT GACGTCCGAA
ACAGACCTGC GTCTGGCGCG CATCAACTAC TATAATGCAT TGTACCTGGT GCTGGCGAGC
AAGATCGACG TTCAGAAAGC GCTCGGACAG ATCAATATCC AGTAA
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| Protein sequence | MNYWSKPQKT TRLALSSAFL FLNFIGSALA QGIQESSREA PVLEQATLQD VVAYAIKNQP
AIQQSLIDEQ ITANQVRAKL ADWYPQINFN YNLQHNFIVQ TSIIAGNPVK LGVNNISAAQ
FTLSQQIFNR DVLLAKRTRG DVLFAASQNT VNNKTDLAVD VSKAFYDVLA TTQQIKVADE
DIVRLERSLR DAENQYKSGI TDKIDFKRAT ISLNNTRANR KSNDEVLKAK LEYLKTLMGY
PLNKALEISY DTLQMEREIA LDTMQNVDLN ARIEYQILAT QKKLAEANLQ YNKWSYLPNL
SLNGAYNLNF QNNQFSDLYN KNYPNSFGLL TLSLPIFQGG KRKANTKQAE WALKRLDWDL
KGLQNNVNSE YAAALANYKG NLTNLLAQKE NVELAREVYD VIQLQYKSGI KTYLEVVTSE
TDLRLARINY YNALYLVLAS KIDVQKALGQ INIQ
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