| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0033 |
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| Symbol | nusA |
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| ID | 8223599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 35354 |
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| End bp | 36595 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644927913 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_003084470 |
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| Protein GI | 255033849 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.122242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.232116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATAGCG GAATATTAAT TGAGTCATTC GCGGAGTTCG CAAGCTCTAA AAACATCGAT
CGTCCCACGA TGATCAGTGT TTTGGAAGAG GTATTTCGTA CTATGATTCG CAAGAAATAT
GGCACCGACG ATAATTTTGA TGTGATTATC AACCCGGAAA GCGGTGACCT CGAAATGTGG
CGGACACGCG AGATCGTAGA CGACAACTCC GAGGACATCT GGGAATATAA TAAAATACCG
TTGAACGAAG CGCGCAAAAT ACAGAGCGAC TTCGAGGTGG GCGAAGAAGT GGCGGAAGAA
GTGAAGCTGG TAGAATTCGG TCGCCGCCTG GTGCAAACTG CCCGCCAGAC CCTGATCCAG
AAGATCAAGG ATATGGAAAA AGAGATCATG TATGAAAAAT ACAAGGATCA GGTGGGTGAA
ATGATCACCG GAGAGGTGTA TCAGACTTTG AGACATGAAG TAATCATCGT GGATTCGGAA
GGTAACGAAC TCTCGCTGCC CCGCACCGAG CAGATCTCGA AAGACCGTTT CCGCAAGGGC
GAATCCGTGA AATCGGTGAT CCATAAAGTG GAAATGAACA ACGGCTCGCC GAAGATCACG
TTGTCGAGAA CATCGCCGGT TTTCCTTGAA AGACTGTTCG AAGTGGAGAT CCCGGAAATC
TACGACGGAA TCATTTCTGT CCGCAAAGTT GTTCGTGAAC CAGGGGAACG TGCCAAAGTG
GCCGTGGAAT CCTACGACGA CCGGATCGAT CCGGTGGGTG CCTGCGTTGG TATGAAAGGC
TCACGCATCC ATTCTATCGT GCGTGAACTG GGCAATGAGA ATATCGACGT GATCAACTAC
ACCGATAACC TCGAACTGCT CATCAGCCGC GCATTGAGCC CTGCGAAAGT AAGCTCGATG
CAGATCGACC GCGAAGCGAA ACGCGTATCC GTGTTCCTCA AACCCGACCA GGTATCACTG
GCCATCGGTA AGGGCGGACA GAATATCAAG CTCGCGGGCA AGCTCGTGGG AATGGAAATC
GATGTATTCC GCGATATCGA AGAACAAAAT GATGAAGACG TCGATCTGAC CGAATTCTCG
GATGAAATCG ACGAGTGGAT CATCGACGAA TTGCACAAAA TCGGTCTGGA TACCGCTAAA
AGCGTACTGG CCCTGAGCAA GGAAGAACTC GTGCGCCGTA CCGACCTTGA AGAAGCGACG
GTAGAGGACG TGCTGGATAT CCTGCGGAAA GAATTTGAAT AA
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| Protein sequence | MDSGILIESF AEFASSKNID RPTMISVLEE VFRTMIRKKY GTDDNFDVII NPESGDLEMW
RTREIVDDNS EDIWEYNKIP LNEARKIQSD FEVGEEVAEE VKLVEFGRRL VQTARQTLIQ
KIKDMEKEIM YEKYKDQVGE MITGEVYQTL RHEVIIVDSE GNELSLPRTE QISKDRFRKG
ESVKSVIHKV EMNNGSPKIT LSRTSPVFLE RLFEVEIPEI YDGIISVRKV VREPGERAKV
AVESYDDRID PVGACVGMKG SRIHSIVREL GNENIDVINY TDNLELLISR ALSPAKVSSM
QIDREAKRVS VFLKPDQVSL AIGKGGQNIK LAGKLVGMEI DVFRDIEEQN DEDVDLTEFS
DEIDEWIIDE LHKIGLDTAK SVLALSKEEL VRRTDLEEAT VEDVLDILRK EFE
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