Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0032 |
Symbol | infB |
ID | 8223598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 32233 |
End bp | 35283 |
Gene Length | 3051 bp |
Protein Length | 1016 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644927912 |
Product | translation initiation factor IF-2 |
Protein accession | YP_003084469 |
Protein GI | 255033848 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.247962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAG ATAAAATGAT GCGCCTTAGC CAAGTGGCAC GGATCCTCAA CGTGGGTATT ACTACGATCG TGGATCATCT GTCTGCCAAG GGGTATAAGG TGGAAAGTAA CCCGAATACC AAAATTAATG CCGATCAAAT TGAGTTTCTT GCGAAGGACT TCAAATCGAA TGAGCTGAGG TCGTCCCTGA CGCAAAAACC GGCCGCTCCT GCTGTGGAAG CGCCTGTTGA AGTGAAGGAC GACAAGGTAA AAAGCGATGT AGAGGGAATT CTCTATTTTA GAAATACACC AAAAGCCGAG GAAAAGCCAG TGGTGGAAGA AAAGCCAGCC GCTTCGGAGC CTGCTTTTGA AAATAAACTT CCCGGTATCA AGGTAGTCGG CAAGATCGAC CTCGACGCAA AACGGCCGGC AGTACAGCCA CCTGCGGCGC CGGAGGAACG CCCTGCACCG GAAGCACCGA AGGAAGTGGT CGCTGAAAGC CCGAAAGCAG CGCCTGCGCC GGTAGCGAAA GAAGAACCGA AACCGGTAGC CGCTCAGCCA GAGCCTGTGA AGGAAACTCC GGTGGAAGCC CCTGCGAAAG AAACGCCTGC GGCCCCCGCA GCGCCGGCCG CAGAAGCTCC CGCGAAGGAA GAACCACGCC CGGCTGCCCC TGCCGAAAGC AAGCCGGAAC CAGTTGAGCC GAAGGAAACG GCGCCAGTTG CCGCTAAACC TGAGCCCGTT GCGCCGCAGC CGGCCGCTAC ACCTGAGGAA CCAAGCGGCG AATCGCAGCT GATCGAAGCG CGCGGTGAGC AGCTCAGAGG CTTGAGGGTG GTAGGAAAAA TCGAGCTGCC TTCCGATAAA AATAAAAAGA AAGATCCTGT TGCATCCAGC GATGCGTCAG CCGATAAAAA ACGTCGCAGA AAGAGAAAGA GAATCCGCGA TGGTGCTGCC GCCCCCGGCG AAAACCGTCC GGCAGAAGGC GCTGCGGCTG CAAATGCCAA CGCAGGCACC ACCAATACAG GTACCGATGC AAACCGGAAC CGCCCTAATA CGCCTGGAAC AACGCAAGGT GGTAACCAGC AGGGTGGACA GCAACGGCCC GGCCAGGGCG GAGGCAACCG CAGCGGTAAT GCCGGCGGCA ACAACCGCAG AGGCAACCGT CGCGAGGAAG TTTCCGACAA GGAAGTTGCA GACAACATCA AGGCCACAAT GGCGCGTATG GGTGGTGGTA ACACCAAAGG TATGGCCAGA GGCAAAGGCC GCCGACGCGA CCGCGGTGAT CAGAACGATC CGAACGGCTT CGGAGATGAA GAAACAAAAG TATTGCGCGT AACCGAATTC GTATCAGCCA ACGACCTCGC GTCGCTGATG GACGTAACGG TTCAGGAAGT AATATCGGTG TGTATGAGCA TGGGTATGTT CGTATCCATC AACCAGCGTC TCGACGCCGA GGCCATCACA TTCATCGCCG ATGAATTCGG CTTCGAAGTA GCGTTCATCT CGGCCGAAGA AGAGGTTCAG AATGACGTTA CCGAAGAGGT GGATGATGAA GAAAGCCTGG TAGAACGTGC ACCGATCGTT ACAATCATGG GTCACGTCGA TCACGGTAAA ACATCGCTCC TCGACTACAT CCGTCAGGAA AACGTCGCCA GCGGCGAGGC AGGAGGTATT ACGCAGCACA TTGGTGCTTA CAGCGTGAAA ACCAAAACCG GCAAACCGGT AACATTCCTC GATACGCCGG GTCACGAAGC ATTTACAGCG ATGCGTGCCC GCGGTGCGAA AATCACCGAC GTTGTCATCA TCGTGATCGC AGCGGACGAC AGCGTCATGC CGCAAACCCG CGAGGCGATC AACCACGCGC AGGTGGCCGG TGTACCGATT GTATTTGCAT TCAGTAAAGT AGATAAGCCA GGTGCCAACA CGGAAAAAAT CCGCGAAGAG CTGGCGAATA TGAACCTCCT GGTGGAAGAA TGGGGTGGTA AATACCAAAC TCAGGAAATT TCTTCCAAAT CAGGATTGGG TATCGACGAA TTGCTTGAAA AAGTATTGCT AGAAGCGGAA TTGCTCGAAC TGAAAGCGAA TCCGAACCGC CGTGCAGTTG GAACAGTGGT GGAAGCATCA CTCGACAAAG GCCGCGGCTA CGTAACGACA ATCCTCGTTC AGACGGGTAC ATTGAAAGTC GGCGACGTGG TATTGGCAGG TGCGCATTTC GGTAAAGTGA AAGCGATGAC CGATTACCTT GGGAAAAGGC TCAAAACGGC AGGTCCGTCC ACGCCGGTGC AGCTGCTCGG TTTGAATGGC GCGCCACAGG CCGGTGACCG TTTCAACGTA TTCGAAAATG AGCGCGACGC CCGCGACATC GCTACCAAGC GTGAGCAGAT CCAGCGCGAG CAGTCGATCC GTACCCGCAA GCACATTACC CTTGAAGAGA TCGGCCGTCG TAAGGCGATC GGTACTTTCC GCGAGTTGAA CCTCATCGTG AAAGGTGACG TGGATGGTTC GGTAGAAGCA CTTTCCGATT CATTGCTGCA ACTTTCGACT TCGGAAGTTC AGGTGAATAT CATTCACAAA GCAGTGGGTC AGATCTCCGA ATCGGATGTG AACCTTGCGA TTGCTTCGGA TGCGATCATC GTCGGATTCC AGGTTCGTCC TTCTTCCAAT GCGAAGAAAA TGGCCGAGCA GGATCAGATC GAGATCCGCC ACTATTCGGT AATCTACCAG GCGATCGAGG AGATCAAAGA CGCGATGACC GGTATGTTGG CTCCGACGAT CGAAGAGATC ATTACCGGAA ACATCGAAAT CCGCGAGGTA TTCAAAATCA GCCGCGTAGG AACGATTGCA GGTTGCTACG TAACCGACGG ATACGTGAAA CGTAACAACA AGATCCGCGT GGTCCGCGAC GGTATCGTAC TTTATACGGG TGAAATCGAC TCTCTGAAAC GTTACAAAGA CGATGTTCAG GAAGTAAGAA ACGGTTACGA ATGTGGTTTG AGCGTCAAAA ACTACAACGA CATCGAAATC GGCGATATCA TCGAAAGTTT CGAGCTTCGC GAAGTGAAAC GGACGCTTTA A
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Protein sequence | MAEDKMMRLS QVARILNVGI TTIVDHLSAK GYKVESNPNT KINADQIEFL AKDFKSNELR SSLTQKPAAP AVEAPVEVKD DKVKSDVEGI LYFRNTPKAE EKPVVEEKPA ASEPAFENKL PGIKVVGKID LDAKRPAVQP PAAPEERPAP EAPKEVVAES PKAAPAPVAK EEPKPVAAQP EPVKETPVEA PAKETPAAPA APAAEAPAKE EPRPAAPAES KPEPVEPKET APVAAKPEPV APQPAATPEE PSGESQLIEA RGEQLRGLRV VGKIELPSDK NKKKDPVASS DASADKKRRR KRKRIRDGAA APGENRPAEG AAAANANAGT TNTGTDANRN RPNTPGTTQG GNQQGGQQRP GQGGGNRSGN AGGNNRRGNR REEVSDKEVA DNIKATMARM GGGNTKGMAR GKGRRRDRGD QNDPNGFGDE ETKVLRVTEF VSANDLASLM DVTVQEVISV CMSMGMFVSI NQRLDAEAIT FIADEFGFEV AFISAEEEVQ NDVTEEVDDE ESLVERAPIV TIMGHVDHGK TSLLDYIRQE NVASGEAGGI TQHIGAYSVK TKTGKPVTFL DTPGHEAFTA MRARGAKITD VVIIVIAADD SVMPQTREAI NHAQVAGVPI VFAFSKVDKP GANTEKIREE LANMNLLVEE WGGKYQTQEI SSKSGLGIDE LLEKVLLEAE LLELKANPNR RAVGTVVEAS LDKGRGYVTT ILVQTGTLKV GDVVLAGAHF GKVKAMTDYL GKRLKTAGPS TPVQLLGLNG APQAGDRFNV FENERDARDI ATKREQIQRE QSIRTRKHIT LEEIGRRKAI GTFRELNLIV KGDVDGSVEA LSDSLLQLST SEVQVNIIHK AVGQISESDV NLAIASDAII VGFQVRPSSN AKKMAEQDQI EIRHYSVIYQ AIEEIKDAMT GMLAPTIEEI ITGNIEIREV FKISRVGTIA GCYVTDGYVK RNNKIRVVRD GIVLYTGEID SLKRYKDDVQ EVRNGYECGL SVKNYNDIEI GDIIESFELR EVKRTL
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