| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0031 |
|---|
| Symbol | |
|---|
| ID | 8223597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 31584 |
|---|
| End bp | 32159 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644927911 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_003084468 |
|---|
| Protein GI | 255033847 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00536785 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.189416 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAT TAACCGAGCG CCAATGGTCG CTGTTTGACT TTGTAAAGGA AATGCACGGT
GAGCAAAAGC GAAAGTACAC AGGCGCACCA TACTACACGC ATTTGCTGAG CGTGGCCGAC
CGGGTGGAGC AATATGTGCA TCAGGGTTAC GAAACGGAAA TCGCGCTCTG CCACGACCTC
ATCGAGGATA CCGAATGCTC GCTGGCCGAT CTTTCTGCAA AACTGATGAG CCTCGGGTAT
AGTATCACGG AAGACGAGGT GATCCTGGCC GGTGTGGACG ATCTCACCGA TAAGTACACG
CATTTGAAAT ACCCGTCCCT GAACCGGGCT CAGCGAAAAG AGCTGGAAGG TGTGCGCATT
ATGGCTTCGA GGCCCATCGC CCAGACCGTC AAATACGCCG ACATCATCGA CAACATGCTT
TCGCTCACCG AGCACGATCC CGGCTTCGCG CGAGTTTACG CACGCGAGGT GGACGGTTAT
CTATGGAAAA TCAACCAGGG TAACCAGCAG CTTTACGCCG CCTGCTGCCA GCTTTTAATG
GAAGTCAAAT GGAAGCTGGG CGTGGATTTG AATTGA
|
|---|
| Protein sequence | MLELTERQWS LFDFVKEMHG EQKRKYTGAP YYTHLLSVAD RVEQYVHQGY ETEIALCHDL
IEDTECSLAD LSAKLMSLGY SITEDEVILA GVDDLTDKYT HLKYPSLNRA QRKELEGVRI
MASRPIAQTV KYADIIDNML SLTEHDPGFA RVYAREVDGY LWKINQGNQQ LYAACCQLLM
EVKWKLGVDL N
|
|---|
| |