Gene Dfer_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0018 
Symbol 
ID8223583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp17665 
End bp18156 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content55% 
IMG OID644927897 
Product(2Fe-2S)-binding domain protein 
Protein accessionYP_003084455 
Protein GI255033834 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.17826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTAT ACAACCTATC ATTGAATGGC AAAAAGGTGA AAGTCGATGT GGAACCCGAT 
ATGCCGCTGC TTTGGGTGAT ACGCGACTTT GCCGATTTGA AAGGGACTAA ATTTGGATGC
GGAATGGCGC TTTGCGGCGC TTGCACGATC CATTTGAACG GTCAACCCGC CCGCGCTTGC
CAGACGCCCG TTTCGAGTAT CGGCAAAAAC GACAAGATCA CGACGATCGA AGGCATCGGG
GAAGGCAAGA TGAGCATTAT TCAGAAAGCC TGGATCGAAG AGCAGGTGCC GCAATGCGGC
TATTGCCAGT CGGGGCAGAT CATGTCAGCG ACCGCTCTCC TGAAATCCAA TCCGAACCCC
ACCGACGCCG ATATCGACGC CGCCATGAGC GGAAACCTCT GCCGGTGCGG TACGTACGAC
CGGATCAGAA AGGCGATCCA CCGCGCGTCG CAGGAAATGA AAGTTGCCGA AAAAGGCATC
GGACAACGCT AG
 
Protein sequence
MAVYNLSLNG KKVKVDVEPD MPLLWVIRDF ADLKGTKFGC GMALCGACTI HLNGQPARAC 
QTPVSSIGKN DKITTIEGIG EGKMSIIQKA WIEEQVPQCG YCQSGQIMSA TALLKSNPNP
TDADIDAAMS GNLCRCGTYD RIRKAIHRAS QEMKVAEKGI GQR