Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0001 |
Symbol | |
ID | 8229421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 2 |
End bp | 1444 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644927881 |
Product | chromosomal replication initiator protein DnaA |
Protein accession | YP_003084439 |
Protein GI | 255033818 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0206444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0774659 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTAAATT ATACATTGGA AAGAATCAGC ACAAATAGAG AGGTAGACCA GGTTTGGGAT GCTTGCCTGA GGATTATTCA GCAGCATATT CCAGAGCAGA GTTTTAAGAC GTGGTTTGAA CCCATTCGTC CCTTAAAACT CTATGGTAAA GTACTTACCG TGCAGGTTCC CAGCCAGTTT TTCTACGAAT GGCTGGAAGA TAACTATGTT AATCTGCTGA GAAAGGCGCT GGATTACGCG ATCGGTCGCG ATGGATTATT GGAATATTCC ATTATTGTCG ACACCGGTAA CGAGAAGCAC CAGCCGCTGA CGATGAACGT CTCAACCCAG AAATCTCCAA ATTATTCCAA ACCGGATAAT TTCTCCACCG ACCCCAGAAT GGGCGCTACG GTGCGGGAAA AAGACCAGGA TTCTCTGACG CTCGACACGT ATCTGAACCC GAATTACTCT TTCGATAATT TTATCGAGGG AGATTGTAAC CGTCTGGCAC GTTCGGCCGG TTTCGCGGTA GCGCAGCGTC CGGGGCTCAC GTCGTTCAAT CCGCTGATGA TGTACGGCGG CGTAGGGCTT GGCAAAACAC ACCTCGTGCA GGCGATCGGG AATTATATTA CCAACCATTA CGAAAACAAG CTGGTACTAT ACGTTTCTTC TGAGAAATTT ACCAACCAGT TCATCAACTC GATCCGGAAC AACACGTTGC AGGAGTTCAC CGATTTTTAC ATGAAAGTGG ATGTGCTGGC GATCGACGAC GTGCAGTTTT TGTCGGGTAA GGAAAAAACG CAGGATACGT TCTTCCATAT TTTCAACCAC CTGCATCAGC TCGGCAAGCA GATCATCATG ACGAGTGACC GCCCGCCGCG TGAGCTGCAA GGCTTGCAGG ACCGCTTGCT ATCCCGCTTC AAATGGGGAC TTACCGCCGA TTTGCAGGCG CCGGATTTCG AAACGCGTAT CGCGATCATC CAGAAAAAGA TCCAGTCGGA AGGTATTTCG ATTGATTATG ACGTGATCGA ATACATCGCG CATAGTGTGA ATTCCAACGT AAGGGAGCTC GAAGGCGTGA TCGTTTCGCT GATGGCGCAG GCGTCGCTTA CCCGCCGGAA TATCGACGTA GAACTGGCCA AAAACACCCT TCGCAACATC GTCATGAACG AGGATAAGGA GGTTACGATC GACACCATTC AGGAAATCAT CGCCGATTAC TTCCAGGTTT CCATCGCCGA CCTGAAAAGC AAAAGCCGCA AAAAGGAGGT CGTTTACCCG CGCCAGCTGG CGATGTACCT CGCCAAGGAA TACACCGATC TGCCGCTCAA ATCCATCGGT TACCATTTCG GCGGCCGCGA CCACAGCACG GTAATCCATT CGATCCAAAG CATTAACCTG CTCATGGACG AAACCCCGGA CGTGGAAGAA ACTTTGCAGA AACTTCGCAG TTACTTTAAG TAG
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Protein sequence | MVNYTLERIS TNREVDQVWD ACLRIIQQHI PEQSFKTWFE PIRPLKLYGK VLTVQVPSQF FYEWLEDNYV NLLRKALDYA IGRDGLLEYS IIVDTGNEKH QPLTMNVSTQ KSPNYSKPDN FSTDPRMGAT VREKDQDSLT LDTYLNPNYS FDNFIEGDCN RLARSAGFAV AQRPGLTSFN PLMMYGGVGL GKTHLVQAIG NYITNHYENK LVLYVSSEKF TNQFINSIRN NTLQEFTDFY MKVDVLAIDD VQFLSGKEKT QDTFFHIFNH LHQLGKQIIM TSDRPPRELQ GLQDRLLSRF KWGLTADLQA PDFETRIAII QKKIQSEGIS IDYDVIEYIA HSVNSNVREL EGVIVSLMAQ ASLTRRNIDV ELAKNTLRNI VMNEDKEVTI DTIQEIIADY FQVSIADLKS KSRKKEVVYP RQLAMYLAKE YTDLPLKSIG YHFGGRDHST VIHSIQSINL LMDETPDVEE TLQKLRSYFK
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