| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_4148 |
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| Symbol | trmE |
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| ID | 8139522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 4741923 |
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| End bp | 4743290 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644871763 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_003023921 |
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| Protein GI | 253702732 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 88 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGTCC GCGACACAAT CGCAGCAATC AGCACTCCGG TAGGGGAAGG CGGCATCGGG
ATCGTCAGGA TCAGCGGCCC TGCATCCCTG CAGATCGCCC GGAGCATCTT CAACGCCAAA
TCGAACGGTG GCCTAAAAAG CCACCGTTTT TCTTATGGCG AAGTGGTCCA GCCCGGAACC
GGCGACTTGG TTGACGAGGC CATGGCCGTC TACATGAAGG CGCCCAACTC CTACACCCGC
GAGGACGTGG TGGAGATTCA GTGCCACGGC GGCACCCTGG TGGTCTCCCG CATCCTGTCG
CTTGTCATCT CACAAGGGGC GCGCCCGGCT GAGCCAGGCG AGTTCACCAA GCGCGCCTTC
CTCAACGGGC GCATCGACCT GGTGCAGGCA GAAGCGGTCA TGGACGTCAT TTCGAGCCGT
ACCGATGCGT CATTGGCCTT GGCCCAGCAT CAGCGGGAAG GGCTCTTGTC GCGGCGCATC
TCGACGGTGA AAGAAGGGAT AGTGTACGCG CTGGCCTATG TCGAGGCGTT GATCGACTTC
CCCGAGGACG ACGTGAATGT CGCCGTAGAG ACCGACGTGT TGGGTAAGGT GGCCCCCGCG
CTGGCTGAAC TTGACGCCCT GATAACCGGA TTCGACGAGG GGAGGGTGCT GCGCGACGGC
GTATCCGTCG TCATCGCCGG CAAGCCCAAC GTAGGAAAGT CCAGCCTGCT CAACACGCTG
TTGAAGGAAA AGCGCGCCAT CGTCACCTCC GTTCCCGGCA CCACCAGGGA CCTTATCGAG
GAGGTCGTCA ACATAAACGG CCTCCCGGTG AAACTCCTGG ATACCGCCGG GATCCGCGAG
TCCGATGACC AGGTGGAGCA GGAAGGCGTG CGCCTTTCGC TGGATCGTAT TCCCAAGGCG
GACCTCGTTC TTTTTGTGAT CGACGGCTCG TCCGTTTTCG GGGTAGAAGA CGCCACGATC
CTGCAGGCCG TCGGATCGAA GAGCTGCATC GTGGTGCGTA ACAAGTCCGA CCTGCCGCTT
GCGGCGGAGC TTCCCTCCGA CTGCTTCGCT CCGGTGGTAG CTATCTCCAC CCACACAGGA
GAAGGTGTCC CTCAACTGCG TGACGCCATC AGCAACGCCT TCATGCACGG GCACGCCATA
GACGGGCGGG AATTCGTCGC GCTCTCGAAG GCGCGGCATC GCGATGCGCT CTTGAAGGCG
AGGGAGTCGC TGCAATCATT CGTGGCGAAC CTGGAGTCGG GGGTGAATAT GGAGCTCCTC
CCCGTGGATC TGCGCGATGC GCTGGACGCG GTGGGGGAAG TCACCGGCGA GACGACGGCG
GACGACGTGC TGGATCGGAT CTTCTCCAGC TTCTGCATCG GGAAGTAG
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| Protein sequence | MYVRDTIAAI STPVGEGGIG IVRISGPASL QIARSIFNAK SNGGLKSHRF SYGEVVQPGT
GDLVDEAMAV YMKAPNSYTR EDVVEIQCHG GTLVVSRILS LVISQGARPA EPGEFTKRAF
LNGRIDLVQA EAVMDVISSR TDASLALAQH QREGLLSRRI STVKEGIVYA LAYVEALIDF
PEDDVNVAVE TDVLGKVAPA LAELDALITG FDEGRVLRDG VSVVIAGKPN VGKSSLLNTL
LKEKRAIVTS VPGTTRDLIE EVVNINGLPV KLLDTAGIRE SDDQVEQEGV RLSLDRIPKA
DLVLFVIDGS SVFGVEDATI LQAVGSKSCI VVRNKSDLPL AAELPSDCFA PVVAISTHTG
EGVPQLRDAI SNAFMHGHAI DGREFVALSK ARHRDALLKA RESLQSFVAN LESGVNMELL
PVDLRDALDA VGEVTGETTA DDVLDRIFSS FCIGK
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