Gene GM21_4144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_4144 
Symbol 
ID8139518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4736269 
End bp4737141 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content60% 
IMG OID644871759 
Productdihydrodipicolinate synthase 
Protein accessionYP_003023917 
Protein GI253702728 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones94 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAAG GAAGCATCGT AGCCATCGTC ACCCCATTCA AAAACGGAGC GGTGGACGAA 
GAGAAACTGC GCGAGCTTGT GGAATTCCAG ATAGAGAACG GTACCGACGC GATCGTTCCC
TGCGGCACGA CCGGCGAGTC TTCCACCCTC AGCTATGTCG AGCACGACCG TGTCATCCAA
GTCGTGGTAG AGCAGGTCAA CAAGAGGGTT CCGGTCATAG CCGGCACCGG CTCCAACTCG
ACCCACGAGG CGATCGAGAT CACCCAGCAC GCCAAGGAGC TGGGCGCGGA CGGCGCGCTC
CTGGTGACCC CGTACTACAA CAAGCCTTCC CAGGAAGGGC TGTTCCGGCA CTACAAAGCG
GTTGCCGACG CCGTGGCGCT CCCCCAGATC CTTTACAACG TACCGGGGCG CACAGGGGTC
AACCTCTTGC CGGAAACGGT GGCTAGGCTG TCCGTGCACC AGAACATCGT GGCGATCAAG
GAGGCAACCG GCTCGCTGCA GCAGGCTTCC GAGGTGCTGG CCCTTTGCGG GGACAAAATC
GACGTCCTTT CCGGTGACGA TTTCATCACC CTCCCCATCA TGGCCGCAGG TGGTAAAGGT
GTCATCTCCG TTACCGCCAA CATCATGCCG AAGGAAGTCT CCTCCCTCGT CGACGCCTTC
AACGCCGGCA ATTTGGAAGA GGCGCGCAGG CTGCACCTGT ACCTTTTGAA GATCTCCAAC
GCGATGTTCA TCGAGAGTAA CCCCGTGCCG GTCAAGGCCG CGGTTTCCCT CATGGGCAAA
TGCAGCTCCG AGGTCCGCCT GCCGCTGGCC CCGCTGATGG AGGCGAACCT GGCCAAGCTG
ACCGCCATCA TGAAGGAATA CAAGCTCATC TAG
 
Protein sequence
MFQGSIVAIV TPFKNGAVDE EKLRELVEFQ IENGTDAIVP CGTTGESSTL SYVEHDRVIQ 
VVVEQVNKRV PVIAGTGSNS THEAIEITQH AKELGADGAL LVTPYYNKPS QEGLFRHYKA
VADAVALPQI LYNVPGRTGV NLLPETVARL SVHQNIVAIK EATGSLQQAS EVLALCGDKI
DVLSGDDFIT LPIMAAGGKG VISVTANIMP KEVSSLVDAF NAGNLEEARR LHLYLLKISN
AMFIESNPVP VKAAVSLMGK CSSEVRLPLA PLMEANLAKL TAIMKEYKLI