Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_4144 |
Symbol | |
ID | 8139518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 4736269 |
End bp | 4737141 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644871759 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_003023917 |
Protein GI | 253702728 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 94 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCAAG GAAGCATCGT AGCCATCGTC ACCCCATTCA AAAACGGAGC GGTGGACGAA GAGAAACTGC GCGAGCTTGT GGAATTCCAG ATAGAGAACG GTACCGACGC GATCGTTCCC TGCGGCACGA CCGGCGAGTC TTCCACCCTC AGCTATGTCG AGCACGACCG TGTCATCCAA GTCGTGGTAG AGCAGGTCAA CAAGAGGGTT CCGGTCATAG CCGGCACCGG CTCCAACTCG ACCCACGAGG CGATCGAGAT CACCCAGCAC GCCAAGGAGC TGGGCGCGGA CGGCGCGCTC CTGGTGACCC CGTACTACAA CAAGCCTTCC CAGGAAGGGC TGTTCCGGCA CTACAAAGCG GTTGCCGACG CCGTGGCGCT CCCCCAGATC CTTTACAACG TACCGGGGCG CACAGGGGTC AACCTCTTGC CGGAAACGGT GGCTAGGCTG TCCGTGCACC AGAACATCGT GGCGATCAAG GAGGCAACCG GCTCGCTGCA GCAGGCTTCC GAGGTGCTGG CCCTTTGCGG GGACAAAATC GACGTCCTTT CCGGTGACGA TTTCATCACC CTCCCCATCA TGGCCGCAGG TGGTAAAGGT GTCATCTCCG TTACCGCCAA CATCATGCCG AAGGAAGTCT CCTCCCTCGT CGACGCCTTC AACGCCGGCA ATTTGGAAGA GGCGCGCAGG CTGCACCTGT ACCTTTTGAA GATCTCCAAC GCGATGTTCA TCGAGAGTAA CCCCGTGCCG GTCAAGGCCG CGGTTTCCCT CATGGGCAAA TGCAGCTCCG AGGTCCGCCT GCCGCTGGCC CCGCTGATGG AGGCGAACCT GGCCAAGCTG ACCGCCATCA TGAAGGAATA CAAGCTCATC TAG
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Protein sequence | MFQGSIVAIV TPFKNGAVDE EKLRELVEFQ IENGTDAIVP CGTTGESSTL SYVEHDRVIQ VVVEQVNKRV PVIAGTGSNS THEAIEITQH AKELGADGAL LVTPYYNKPS QEGLFRHYKA VADAVALPQI LYNVPGRTGV NLLPETVARL SVHQNIVAIK EATGSLQQAS EVLALCGDKI DVLSGDDFIT LPIMAAGGKG VISVTANIMP KEVSSLVDAF NAGNLEEARR LHLYLLKISN AMFIESNPVP VKAAVSLMGK CSSEVRLPLA PLMEANLAKL TAIMKEYKLI
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