| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_4107 |
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| Symbol | |
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| ID | 8139481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 4689534 |
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| End bp | 4691321 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644871722 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003023880 |
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| Protein GI | 253702691 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 103 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTATC CCCGCCCGCA ATTGCAACGC CCCAACTGGC ATACGCTCGA CGGCCAGTGG
CACTTCAGCT TCGACGACGA TCTCTCTTAC AGCATTCCGG CCGACGTGAA AGAGTGGCCC
CTCACCATTG AGGTACCGTA CGCGCCCGAG AGTGAGGCAA GCGGCATCGG CGACACCTCC
TTTCACCATG CCTGCTGGTA CCAGCGCGAG TTCTTCTACG ACGCGAGCGA CGGGAAGAAG
GTGCAGCTCC ATTTCGGCGC CGTCGATTAC CTGGCGCACG TCTGGGTCAA CGACATGCTG
GTGGCGCGGC ACCGAGGCGG CTTCACCCCG TTCAGCGCCG ACATCACCCA CGCCCTCGAT
CCTTCCGGGC GCCAGGTCGT GACCGTGCGG GTCGAGGACG ACCCTGAGGA TCTGGAAAAG
CCGCGCGGAA AGCAGGACTG GAAGCTGGAG CCGCACGCGA TCTGGTACTA CCGCACCACC
GGCATCTGGC AGACCGTCTG GCTGGAATCG GTCCCCGAGA CCTACCTCAA GAAGCTGCGC
TGGTCGCCGC ACCTGGAGCG CTGGGAGGTG GGATTCGAGG CCTTCATCGT GGGGCCTATC
GCGGACCAGA TGGAAGTGAA CGTGCGGCTT TCCTTCAGCG ACCAGCTCCT GGTCGAGGAC
CGCTACCGGG TGATCCACGG CGAGGTGCAC CGGCGCATCG CCCTCTCCGA CCCGGGGATC
GACGACTTCA GGAACGACCT CCTCTGGTCC CCGGAGCACC CGAGGCTGAT CCACGCCGAC
ATCAAGCTGA TGCAGGGGGG CGAGGTGATC GACGAGATCA CCTCCTACAC CGCGCTCCGT
TCCGCCAAGG TGCACCGGGA CCGGTTCCTC CTGAACGGGC GGCTCTATCC GCTCAGGCTG
GTGCTGGACC AGGGTTACTG GCCGGAAACG CTGATGACTC CCCCCTCCGA CGAGGCGCTC
AAGCGGGACG TCGAGCTCAC CAAGGCGATG GGGTTCAACG GGGTGAGAAA GCACCAAAAG
CTGGAGGACC CGCGCTACCT GTACTGGGCG GATCGGCTGG GGCTCGTGGT CTGGTCGGAG
ATGCCGAGCG CCTTCCGCTT CACCACGCGC GCGATAAAAA GGCTGATGCG GGAGTGGATC
GAGGCGATCG ATCGTGATTA CAGCCACCCC TGCGTCATCG TCTGGGTCCC CTTCAACGAG
TCGTGGGGGG TCCCTGACTT GACGGCCACC AAGGCGCACC GGGACGCGGT GCACGCCTTC
TACCACCTCA CCAAGACGCT CGACCCCGAG CGGCCGGTGA TCGGCAACGA CGGCTGGGAA
AGCTCCGCCA CCGACATCAT CGGCATCCAC GACTACGACA ACAACCCCGA GAGGCTCGCG
GAGCGCTACG GCCCGCAGGT GAAGCCGGAG GAGCTCTTCG ACCGGCGCCG CCCGGGCGGG
CGCATCCTCA CCCTCGACGG CTATCCGCAC CGGGGGCAGC CCATCATCCT CACCGAGTTC
GGCGGCGTCG CCTACGTAAA ACCCTCGGAC GCCCTGCACC AGAAGGCGTG GGGGTATTTC
CGCCACGACA AGATCGAGGA GTTCGAACGC CTCGCCCTCT CCCTCATCGA GACCGCCCGC
GGCGTCGCCA TGTTCAGCGG CTTTTGCTAC ACGCAATTCG CCGACACCTT CCAGGAGGCC
AACGGCCTCC TCTTCGCGGA CCGGACCCCG AAGATCCCGC TGGAGCGGAT CGCCGACGCG
GTGCGTGGGA AGGTCGAACA GGGCGCGCTC TTCTGGGAAA GCACCTGA
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| Protein sequence | MDYPRPQLQR PNWHTLDGQW HFSFDDDLSY SIPADVKEWP LTIEVPYAPE SEASGIGDTS
FHHACWYQRE FFYDASDGKK VQLHFGAVDY LAHVWVNDML VARHRGGFTP FSADITHALD
PSGRQVVTVR VEDDPEDLEK PRGKQDWKLE PHAIWYYRTT GIWQTVWLES VPETYLKKLR
WSPHLERWEV GFEAFIVGPI ADQMEVNVRL SFSDQLLVED RYRVIHGEVH RRIALSDPGI
DDFRNDLLWS PEHPRLIHAD IKLMQGGEVI DEITSYTALR SAKVHRDRFL LNGRLYPLRL
VLDQGYWPET LMTPPSDEAL KRDVELTKAM GFNGVRKHQK LEDPRYLYWA DRLGLVVWSE
MPSAFRFTTR AIKRLMREWI EAIDRDYSHP CVIVWVPFNE SWGVPDLTAT KAHRDAVHAF
YHLTKTLDPE RPVIGNDGWE SSATDIIGIH DYDNNPERLA ERYGPQVKPE ELFDRRRPGG
RILTLDGYPH RGQPIILTEF GGVAYVKPSD ALHQKAWGYF RHDKIEEFER LALSLIETAR
GVAMFSGFCY TQFADTFQEA NGLLFADRTP KIPLERIADA VRGKVEQGAL FWEST
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