Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_4087 |
Symbol | |
ID | 8139461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 4667612 |
End bp | 4668955 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644871702 |
Product | MATE efflux family protein |
Protein accession | YP_003023860 |
Protein GI | 253702671 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 140 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGCGTC TCTTTATCAA AAGAAGAAGG AAACCGGTTT CGATCCGCCG CAACGTCGCG GCGCTTTCCA TGCCGGTGCT CCTGTCGTCC CTTTTCCAGC GCCTGGTTTC CATCGTCGAC ATCTTCATGG TCGGCGGGCT GGGAGCCGCA GCCATCGCCG CCACCGGCCT CGGCCAGTTG CTGATCTTCG TGACCATGAC GGTGTTCTGG GGCCTTTCGA CCGGCGCCAA CGTGGTCATA GCGCATCTTT GGGGCGCTGG GCGTCATCTG GAGGCGCGCC GGGCCGGGTT CGCTTCGCTT TTGCTTTGCG CCCTCCTCGC CGTCGCGGCG ACGCTTTTGG GGATCGGCTT CGGAGCCGAT GTGGCGACCT TCATGGGGGC GAGCAGCGAC GTCCTGGCCT ACGCCTCGCC TTACATAAGA CTGGTCTTTC TCTACTTCGC CTTTACCGCC GGGCTCAACA TCCTCTCCGC CATCAACCAG GGGATCGGCA ACACCAGGAC GCCGATGGAG GCAATCCTCC TGGTCAACAT CCTGCACGTG GTCATCGCCT ACCCGCTCAT CTACGGCAAG TTCGGCTTCC CCAGCTACGG GGTTATCGGA GCCGCTTACG CGATCAACAT CTCGGAGGCT GCAGGTTTCA TCTACCTCCT GATCCAGTCG CTCAGGAAGG GGTATCTGAA AATCGGCCCT CCCGACATGG TGCTCCTGAA TAAAGTATGG AAAATCGGCT ATCCGGTCGC GCTGGAGCGA ATAGCCCAGC AGTCGGGACA GCTTTTCTAC TCTAAGTTCA TCATCGGCTT CGGCACCGCC GCCTACGCGG CGCACCAGAT CGGGCTCTCC ATCGAATCGC TTTCCTTCAT GCCGGGGGCC GGCATGGGGA TCGCCGCCGC CACCTTGATG GGGCAGTCGC TGGGCGCGAA GAAACTCAGG CGCGCCCACA TGAGCCACAC CGAGGCGCTG CGGCTCGCCA TCATCGTCAT GGCCTGCATG GCGCTCCTCT TTTTCTTCAT TCCGCACCAC CTGATCGCCC TCTTCACCAG CGATCCCGAC GTCATTGAAA AGGGGAGCGT CTTCCTGAAG CTGGTCGCCT TCGCCCAGGT GCCGCTCGCC ATCTCCTTCG TCTATGCCGG CAGCCTGCGC GGTACCGGCG ACACGCACTA CGTCTTCCTG GTAACGCTCG TCGCCATGTG GGGGATCAGG GTGCTCCTCT CCTACGTCGC CGCGGTCCCG CTGCATCTCT CGCTCTACGC CGTCTGGGGG GTGTTCCTGG TGGACTGGTT CTTCAGGGCC GGCGCCTTCT ACTGGCGCTA CCAGCGCCGC GACCTGCACA GCGTCATCAT CTAG
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Protein sequence | MKRLFIKRRR KPVSIRRNVA ALSMPVLLSS LFQRLVSIVD IFMVGGLGAA AIAATGLGQL LIFVTMTVFW GLSTGANVVI AHLWGAGRHL EARRAGFASL LLCALLAVAA TLLGIGFGAD VATFMGASSD VLAYASPYIR LVFLYFAFTA GLNILSAINQ GIGNTRTPME AILLVNILHV VIAYPLIYGK FGFPSYGVIG AAYAINISEA AGFIYLLIQS LRKGYLKIGP PDMVLLNKVW KIGYPVALER IAQQSGQLFY SKFIIGFGTA AYAAHQIGLS IESLSFMPGA GMGIAAATLM GQSLGAKKLR RAHMSHTEAL RLAIIVMACM ALLFFFIPHH LIALFTSDPD VIEKGSVFLK LVAFAQVPLA ISFVYAGSLR GTGDTHYVFL VTLVAMWGIR VLLSYVAAVP LHLSLYAVWG VFLVDWFFRA GAFYWRYQRR DLHSVII
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