Gene GM21_4034 details

Gene Information

• Locus tag: GM21_4034
• Symbol: atpC
• ID: 8139408
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 4617971
• End bp: 4618387
• Gene Length: 417 bp
• Protein Length: 138 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644871650
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_003023808
• Protein GI: 253702619
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 44
• Fosmid unclonability p-value: 0.0000113371
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCTGAAA AACTGAAGGT TGAACTGGTA ACCCCGTACA AGAAGGTCCT CTCCGAAGAG 
GTCGACGAGA TCACCGCGAC CGGTGCCCTC GGCGAATTCG GCGTTCTGCC GGGCCACGCT 
CCCTTCCTCA CCTCGCTGAA GATCGGCGAG CTGGCCTACA GAAAGGACGG CGTGTCGCAT 
CACATGGCAC TGAACTGGGG CTACTTCGAA GTCGAGAACG ACACCGTGAC GGTGCTGGTC 
GAGACCGCTG AGAAGGCGGA CGAGATCGAC CTGGAGCGCG CCAAGGCGGC GCTTGGGCGC 
GCCGAGGTCG AGCTGAAGGC CCTGACCCCG GAGGACAAGA ACTTCCGGAT CTACGAGGCC 
GCGCTCGAGC GCGCTCTGAT CAGGGTCCAG GTCGCCGGCA AGGCGACCAG ACGCTAA 

 

Protein sequence

MAEKLKVELV TPYKKVLSEE VDEITATGAL GEFGVLPGHA PFLTSLKIGE LAYRKDGVSH 
HMALNWGYFE VENDTVTVLV ETAEKADEID LERAKAALGR AEVELKALTP EDKNFRIYEA 
ALERALIRVQ VAGKATRR