Gene GM21_4008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_4008 
Symbol 
ID8139382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand- 
Start bp4594366 
End bp4594851 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content59% 
IMG OID644871624 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_003023782 
Protein GI253702593 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones4 
Fosmid unclonability p-value2.6243400000000003e-29 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGAAA ATAATCGCGC TGTAGTGAAA CTGAAAGAGC GTTTCGCAAA TGCCCTCCTC 
GACTGCACGG AATATCGGGG CGAGGTGACG GTCACCGTGA AGAAAGAGAA CATCCTCGAG 
GTGCTCAAAT GCCTCAGGGA CGACCTCCGC TACAACTTCC TGACCGACGT CACCGCCGTC 
GACTACCTAG GCCAGGATCC GCGTTTCATG GTGGTCTACC ACCTCATGTC GATCCCGAAC 
AAGGACCGCA TCAGGGTGAA GGCGCCGCTG ACCGAATCGG ATTGCTCCAT CGATTCCGCC 
ACCGCGCTCT GGAACTCCGC GGACTGGGTC GAGCGTGAGG CGTACGACAT GTTCGGCATC 
GAGTTCAAGA ACCACCCGAA TCTGGTGCGT ATCCTGATGA CCGACGACTG GGTGGGGCAT 
CCCCTCAGGA AGGACTACCC GCTGCAGGGA CCGGACCGCG AACCGTACAA GGGTCGGCTG 
TCTTAG
 
Protein sequence
MAENNRAVVK LKERFANALL DCTEYRGEVT VTVKKENILE VLKCLRDDLR YNFLTDVTAV 
DYLGQDPRFM VVYHLMSIPN KDRIRVKAPL TESDCSIDSA TALWNSADWV EREAYDMFGI 
EFKNHPNLVR ILMTDDWVGH PLRKDYPLQG PDREPYKGRL S