Gene GM21_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3988 
Symbol 
ID8139362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4571141 
End bp4571716 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content57% 
IMG OID644871604 
Productnucleoside recognition domain protein 
Protein accessionYP_003023762 
Protein GI253702573 
COG category[R] General function prediction only 
COG ID[COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.000000391988 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGCGG TGTGGTTGGT TCTCTTCTCC GTTAGCATCG TTTTCGCCAT ATGCACCGGC 
AACCTGGAAG CGTTCACCAA GTCGATCTTC GAAGGCGCGA AGTCAGCGGT CGAGGTGTCG
CTGTTTCTGC TGGGTATCGT GTCGGTCTGG ATGGGGATCA CCAGGATCCT GGAGGATTCC
GGCCTCATCT ACCGTATAGC ACACCTGTTC AAGCCGGTAA TCTCGCGTCT TTTCCGGAAT
ATCCCCGGCG ATCACCCCTC GATCAGCGCC ATCACCTTGA ACGTGCTGGC GAACCTCTTC
GGCCTGGGCA ACGCGGCGAC GCCGCTGGGG ATCAAGGCGA TGCAGGAGCT CGATACCCTG
AACGAGGAGA AGGGAACCAT CACCTTCGAG ATGATGACCT TCATCGTCCT CAACACCGCC
AGCATCCAGT TGATTCCCTT CTCGGTCATC GGGATACTGG CCAGCTATAA TGCCGTGAAC
CCTGCAGGGG TAGTGCTCCC GGTGCTGATC GCCACGGTGA TATCCGCGCT GACGGCGCTA
GTGATACTGT TCTCGTTCAG GAAGGTGCTC AAATGA
 
Protein sequence
MNAVWLVLFS VSIVFAICTG NLEAFTKSIF EGAKSAVEVS LFLLGIVSVW MGITRILEDS 
GLIYRIAHLF KPVISRLFRN IPGDHPSISA ITLNVLANLF GLGNAATPLG IKAMQELDTL
NEEKGTITFE MMTFIVLNTA SIQLIPFSVI GILASYNAVN PAGVVLPVLI ATVISALTAL
VILFSFRKVL K