| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3967 |
|---|
| Symbol | |
|---|
| ID | 8139341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 4551716 |
|---|
| End bp | 4552795 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644871583 |
|---|
| Product | Methyltransferase type 12 |
|---|
| Protein accession | YP_003023741 |
|---|
| Protein GI | 253702552 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.0000000336938 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAA GCGTGCGCCG CCATTACGAG CTTTACCCCT ACCCGGACTA CCCCCTTTTG
GCCTCGGTGC GCCGCTGCGA CACCTACGCC AACAACCTGG ACGCCCTCTG GGCGCGTTTC
AACGGGGAAC TCCCCCCCGA CCGCCTGCGC CGCATCCTCA TCGCCGGCTG CGGCAGCTTC
GCCCCCTATC CCTTCGCCCT CGCCAACCCC GACAGCGCCA TCACGGCGCT GGACCTCTCG
ACCAAAAGCC TGCGCCGGGC CCGGCTGCAC TGCCTGCTGC ACGGCGTCAC GCGCCCCGAC
TTCGTGTCGG GGGACCTGCT CGACCCATTG ACCGCGCCGG GGCCCTTCGG GTTCATCGAC
TGCTTTGGGG TGCTGCACCA CCTGGAAGAT CCGCTGGCGG GACTGCGAGC CCTGGAAAAG
AGGCTGGGGG AGGGGGGGAT ACTGCGGGTG ATGGTCTACA GCACCTATAC CCGCTTCGAG
GAAGACTCGA TCCGGCGGGC GCTGCGCCTT TTGCAGGTGC GCACACCGGA ACAGGTGCGG
CAGATGGTGG CCCGCGCGAG GAAGGGGTCG CGCCTGCGGG AGTTCTTCGA GCAGTCGCAG
GAGGTGTCGT CGCGCTCGGG GCTCGCCGAC GCGCTGCTCC ACCCCTTGGC GAGCAGCTTC
AAGATCGACC GCTTTCTGGA GCTGGTGGCA AAGAGCGGGG TGAAGCCGCT TCTGTTCGCC
CATCGCGGCG CCCTGTCCGA TCCGCTAGAG GAGGCGGCCA GGATCCGGGA GCTGGAGGCA
CGGCGCGAAT CGCCGGGAAA CTTCGTGCTC TACCTGGGGA AGGATGCCAA GGGGGGGTGC
CGGGAGGGGG GATTGTTCCA GTTGAATCCC TCCCTCGTGG GGGTGCTGTC GCGGCCGCGC
CTGGCGCCCT TGCGGATACC GGGGCGTCTG GGGGAGGCGA ACCAACCTCT CACCCGCGAC
GAGCGCGGCT TTTTGCGCCG CTTCAAAAAG CGGGTCCCCG CAGCCGCGCT CTCACGCGAG
GATCTGATCC GGGCTGAAGG CTACGCCGGC AAGCTCTTCC TGCTTCGCTG CCGCAGCTGA
|
|---|
| Protein sequence | MPESVRRHYE LYPYPDYPLL ASVRRCDTYA NNLDALWARF NGELPPDRLR RILIAGCGSF
APYPFALANP DSAITALDLS TKSLRRARLH CLLHGVTRPD FVSGDLLDPL TAPGPFGFID
CFGVLHHLED PLAGLRALEK RLGEGGILRV MVYSTYTRFE EDSIRRALRL LQVRTPEQVR
QMVARARKGS RLREFFEQSQ EVSSRSGLAD ALLHPLASSF KIDRFLELVA KSGVKPLLFA
HRGALSDPLE EAARIRELEA RRESPGNFVL YLGKDAKGGC REGGLFQLNP SLVGVLSRPR
LAPLRIPGRL GEANQPLTRD ERGFLRRFKK RVPAAALSRE DLIRAEGYAG KLFLLRCRS
|
|---|
| |