| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3953 |
|---|
| Symbol | |
|---|
| ID | 8139327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 4535781 |
|---|
| End bp | 4536926 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644871569 |
|---|
| Product | peptidase C1A papain |
|---|
| Protein accession | YP_003023727 |
|---|
| Protein GI | 253702538 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.00000017791 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACCC CCTGTTTGAT TTGGCGCTTT GGAAGGCACC CCTTCTCCAG CACGGAACTG
CGCCGGCACA TCGTGAGCAT CGGCAACAAC GGCGTGCTGC GGCCGGGGGG AAGCTACGGC
ACCACCAGGC ACGACGTGGA GGACATCTTC GCGAGGGACT TCCCTGCGCT CACGGCGGGG
TGGAAAAGGA AAAGGCTGCT CCTATACGCG CACGGGGGGC TTGTGGACGA GGCGTCGGCG
GTGCAGCGGG TGGCCGAGTA CCGCACCGAG CTCTTGAAGG CGGAGATCTA CCCCCTGGCC
TTCATCTGGC ACAGCGACAT GTTCACCACC ATCACCAACA TCCTCACCGA TGCCATGAGA
AAGCGGAGGT CGGAAGGGTT CCTCGACGAC AGCTTGGATT TCATGCTGGA CCGCCTGGAC
GACGCACTGG GGCCGGTGGC GCGGCTGGCA GGAAAGCCGC TTTGGAGCGA GATGAAGCAA
AACGCGCTCG CGGCCGGGAC CGGTGAGGAG GGAGGCGCGC GCGTGGTCCT GGAGCAGATC
AATGGGCTAC CCGCCGATGT GGAGATCCAC ATAGTGGGGC ACAGCGCCGG ATCGATCTTC
CACGCGCCGG TGGTCGAGGG GCTGGCGAAG ACGGGGCGCC CGATCAAGAG CTGCATCCTC
TGGGCGCCGG CCTGCACCAC GGCGCTCTTC AAGCAGAGCT ATCTCCCCTC CATAGACAGC
GGCCACATCG GGCGCTTCAC CCTCTTCACC TTGAACGACA AGGCGGAGCA GTGCGACAAC
TGCGCGCGCA TCTACAACAA GTCGCTCCTG TACCAGGTGT CGAACGCGTT CGAGGCCTGG
CCGCACATCC CGCTCTTCAA GGACGGGGTG CCGCTATTGG GGCTGGAGCG CTGCATCGAG
AGCGACTCAA GGCTCAGGGA TCTCTTCTCC GGCAAGAACG CGGACTGGGT CAGGGCTCCG
AACGACCTGA AGGACTCCCC CTGCGACTAT TCCACGGCCC GCCACCATGG GGATTTCGAT
GACGATCAGG CCACGGTCAG GGCGACCCAG GCGCGCATGC TGGGTAAAAC GGAACTGAAG
GGGGAATTCA GCTTCGAGGT CACCAAGTCG TCCTCGCGCC GGAGACGGGC GAACCTCTCG
CGGTGA
|
|---|
| Protein sequence | MSTPCLIWRF GRHPFSSTEL RRHIVSIGNN GVLRPGGSYG TTRHDVEDIF ARDFPALTAG
WKRKRLLLYA HGGLVDEASA VQRVAEYRTE LLKAEIYPLA FIWHSDMFTT ITNILTDAMR
KRRSEGFLDD SLDFMLDRLD DALGPVARLA GKPLWSEMKQ NALAAGTGEE GGARVVLEQI
NGLPADVEIH IVGHSAGSIF HAPVVEGLAK TGRPIKSCIL WAPACTTALF KQSYLPSIDS
GHIGRFTLFT LNDKAEQCDN CARIYNKSLL YQVSNAFEAW PHIPLFKDGV PLLGLERCIE
SDSRLRDLFS GKNADWVRAP NDLKDSPCDY STARHHGDFD DDQATVRATQ ARMLGKTELK
GEFSFEVTKS SSRRRRANLS R
|
|---|
| |