Gene GM21_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3948 
Symbol 
ID8139322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4532737 
End bp4533450 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content63% 
IMG OID644871565 
Productglycosyl transferase family 2 
Protein accessionYP_003023723 
Protein GI253702534 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.00000197506 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACGA TCTCGATCGT CATACCTGCA CATAACGAGG CAGGCAACAT CGGGACGCTG 
GTGCAGGAAA TTCTGGCCAC CCGGCTTGAA TGCGAGATCG TCGTGGTCGA CGACGCCAGC
ACCGACGAAA CCCACCAAAC GCTCCTCGCT CTGAAAAAGA ACGTCCCCTC GCTGAAGATA
GTCCAGCACG ACCGCTCCTA CGGCCAGAGC GCCGCCGTCG CCACCGGGAT CAGGCATGCC
GGCGGAGAGC TCATCGCCAC CATGGACGGC GACGGGCAAA ACGATCCGGC CGACATCCCG
AGGATGGTGC AGGCGCTCGT GAAAAGCGGC AACGAAAACC TCAAGATGGT CGCCGGGTTC
CGCAAAAAGC GCGACGACGC GGCATGGCGC ATCATCTGCT CCAAGATCGC CAACGCCTAC
CGCCGCTTTT TCTTAAGGGA CGAGACCCCC GACACCGGCT GCGGCCTCAA GGTGTTCTAC
CGCTCGGCGT TTTTGAACCT CCCCTTCTTC GACCACATGC ACCGCTTCCT CCCGGCCCTG
ATCAGGATGC AGGGGGGCGA GGTGATCTCG GTCGAGGTGG GGCACCGCGC CAGGATCCAC
GGCGTCTCGA AGTACGGGAC GCTGAACCGG CTCTGGGCCG GCATAGTCGA CGTCTTCGGC
GTCTGCTGGC TGCGCATGAG GGCCAAGAAC GTGAAGATCG CGAGGTGCGA CTGA
 
Protein sequence
MSTISIVIPA HNEAGNIGTL VQEILATRLE CEIVVVDDAS TDETHQTLLA LKKNVPSLKI 
VQHDRSYGQS AAVATGIRHA GGELIATMDG DGQNDPADIP RMVQALVKSG NENLKMVAGF
RKKRDDAAWR IICSKIANAY RRFFLRDETP DTGCGLKVFY RSAFLNLPFF DHMHRFLPAL
IRMQGGEVIS VEVGHRARIH GVSKYGTLNR LWAGIVDVFG VCWLRMRAKN VKIARCD