Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3944 |
Symbol | |
ID | 8139318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 4529876 |
End bp | 4530796 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644871561 |
Product | Citrate (pro-3S)-lyase |
Protein accession | YP_003023719 |
Protein GI | 253702530 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | [TIGR01588] citrate lyase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.0000538772 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGGATT ACAAGCTCAG GCGCTCGCTT TTGTACGTCC CGGGCAACAT GCCCTCCATG CTGCAAAACA TCCCCATCTT CAACTGCGAT TCCGTGATCA TCGACCTGGA GGACGCGGTT CCGCTCTCCG AGAAGGACGC GGCGCGCCAC CTGGTGAAGC GCTTCCTCAT GGAGTACACC GACCGCAACA AGGAGCTCCT GGTCCGGATC AACCCGCTCG ACACCCGCTG GGGGTACGAG GACCTGAAGG TGGTGCTCCC GGCCATGCCG GACGGCATCC GCCTCCCCAA GGCGGACACC CCGGAGATCG TGGAGCGGCT GGACACCCTC TTGACCGAGT TCGAGGAGGA GCTCGAGGTC GAGATCGGGC GCTTCGGCAT CCTCCCCTCG CTGGAGAGCG CGCTCGGCGT CATCAACGCG GTGGGGATCG CCCGGAGCTC GCAGCGCATC TTCGCGCTCG CCTTCGGCGC CGAGGACTAC ACGGCCAGCA TGGAGATCGA GAGAAGCCGC GGCGGCGAGG AGCTCTTCAA CGCCAGGACC CGTGTCCTTT GGGCCGCCAA GGCGAACGGG ATCCAGGCGC TCGACACCAT CTTCGCCGAC GTGGGGGACA TGGAGGGGCT TAGGGCCGAG ACCGAGCTGG CCAAGAGGCT CGGCTACACC GGCAAATGCC TGGTGAACCC GCGCCAGATC GAGGTGGTGC ACGAGGTCTT CGCCCCCAAA CAGCACGAGG TGGAGTACGC CCTGCAGGTG ATCGAGGCGA TAAAGCGGGC GCGGCAGCTC GGTACCGGCG TCATCTCGCT CGGGGGGAAG ATGGTGGACG CCCCGGTGGT GAAGCGGGCG GCGCGCGTGC TGAGGACCGC CTACGCCCAT GGCATGGTCG ACGCACTGAT AGACGAGGAG GCGATACATG GCGCTCAATA G
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Protein sequence | MPDYKLRRSL LYVPGNMPSM LQNIPIFNCD SVIIDLEDAV PLSEKDAARH LVKRFLMEYT DRNKELLVRI NPLDTRWGYE DLKVVLPAMP DGIRLPKADT PEIVERLDTL LTEFEEELEV EIGRFGILPS LESALGVINA VGIARSSQRI FALAFGAEDY TASMEIERSR GGEELFNART RVLWAAKANG IQALDTIFAD VGDMEGLRAE TELAKRLGYT GKCLVNPRQI EVVHEVFAPK QHEVEYALQV IEAIKRARQL GTGVISLGGK MVDAPVVKRA ARVLRTAYAH GMVDALIDEE AIHGAQ
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