Gene GM21_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3939 
Symbol 
ID8139313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4525109 
End bp4525858 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content66% 
IMG OID644871556 
ProductMethyltransferase type 12 
Protein accessionYP_003023714 
Protein GI253702525 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.00136325 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCTCA GGGAAATGAG CGACCCCCAG GCTTGCAGGC ACCCTTGGGA GACGTCCCGT 
GCCGCGGCCG TCGCCAAACT GCTGCAGCCG TACCTGCAGC GGGGGGTGTC GGTGCTGGAT
CTCGGTTGCG GCGACGGCTA TCTCAGCCGC ATCGTTTTCC GGCGTGTTGC CGGGAGCCAG
GTGACGGCGG TCGACCCGAA CCTGACCCCG GAGCAACTCG CCATGCTGCG GGAAGAGGGG
AACGGCTTCG CCTACCAGAC CGAGCTCCCC CCCGACGAAA GCCGCTTCGA TCTCACCTTG
CTTTTGGACG TTCTCGAACA CGTGCCGGAG GATCGTGCCT TCCTGGCCCA GGTCGTGGCG
CGGCACGCGG GAGATAGGGG ACGCGTGCTG GTGACCGTCC CCGCCTTCCC GGCCCTTTAC
AGCGGCCATG ACTTCTCCTT GGGCCATTAC CGGCGCTACC GCTTGCAGGA GCTTGAGCGG
CACTTAGCCT CCGCCGGGCT CGCCGTCCTC GCCTCCGGGC ATCTTTTCGG GTCGCTCCTT
ATCCCCAAGT ACCTGCTTTT CAAGGTGATC GACCGCGCAC GCGGCTCGGA GGGGGTCGGC
TCTTGGAGTG GGGGGCGGAC GCTCACCGCG CTACTTGAAA GCTGGCTCCG GCTGGAGAAT
TCCCTGATGA TCCTCTTGGC GCGCCGGGGG GTGAGGCTTC CAGGACTCAC TGCCTGGGCG
CTGTGCGAAA AACGACCTTC CGGGCCTTGA
 
Protein sequence
MDLREMSDPQ ACRHPWETSR AAAVAKLLQP YLQRGVSVLD LGCGDGYLSR IVFRRVAGSQ 
VTAVDPNLTP EQLAMLREEG NGFAYQTELP PDESRFDLTL LLDVLEHVPE DRAFLAQVVA
RHAGDRGRVL VTVPAFPALY SGHDFSLGHY RRYRLQELER HLASAGLAVL ASGHLFGSLL
IPKYLLFKVI DRARGSEGVG SWSGGRTLTA LLESWLRLEN SLMILLARRG VRLPGLTAWA
LCEKRPSGP