| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3899 |
|---|
| Symbol | engB |
|---|
| ID | 8139273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 4485766 |
|---|
| End bp | 4486410 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644871516 |
|---|
| Product | ribosome biogenesis GTP-binding protein YsxC |
|---|
| Protein accession | YP_003023674 |
|---|
| Protein GI | 253702485 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0218] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.00203743 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGATAGTAA AGAACACAGA GTTTATTAAA AGCGCCACCA GACCCGCCCA TTACCCGGAG
GGGCACCTCC CCGAGATCGC CTTCGCCGGG CGCTCCAACG TCGGGAAGTC GTCCCTGGTC
AACGTGCTGG TGAACCGGAA GAACCTGGTC CGCACCAGTT CCACCCCCGG CCGCACCCAG
CTGATCAACT TCTTCCAGGT AAACGACGAC TTCATGCTGG TCGACCTTCC CGGTTACGGC
TACGCCAAGG TTCCGTTGGC CGTAAAGAAG GAGTGGCGGC CCATGATGGA GACCTACCTG
TCCAAGCGCC GGAACCTGCG CGGGGTGGTG CTGATCCTCG ACATCCGCAG GACCCCGACG
GAAGAGGACC TGCAGATGCT CACCTGGCTG CGCGCCTTCT CGGTCCCCCC GGTCATCGTG
ATCACCAAGT GCGACAAGGT GTCGAAGAAC GAGCGTGCCC GGCAGAGCGC CATCATCATG
GAGAAGATGC ATCTCAAGAA GGAGGAGCTC AACTACTTCT CGGCGCTTTC CAGGGAAGGG
AAGGACGCCG TCTGGGCCCG CATCGACGCT TTGCTGGAGC CCACGGCGGC GGAAACACCG
GGAATTCCAG AGGAACCGGC GCCGCCAGGT CCGGTTAATG ATTGA
|
|---|
| Protein sequence | MIVKNTEFIK SATRPAHYPE GHLPEIAFAG RSNVGKSSLV NVLVNRKNLV RTSSTPGRTQ
LINFFQVNDD FMLVDLPGYG YAKVPLAVKK EWRPMMETYL SKRRNLRGVV LILDIRRTPT
EEDLQMLTWL RAFSVPPVIV ITKCDKVSKN ERARQSAIIM EKMHLKKEEL NYFSALSREG
KDAVWARIDA LLEPTAAETP GIPEEPAPPG PVND
|
|---|
| |