| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3885 |
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| Symbol | |
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| ID | 8139259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 4471943 |
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| End bp | 4474222 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644871502 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003023660 |
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| Protein GI | 253702471 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCCAA TCATCACCAT CACCGACCAT TGCCGCAAAT GCTACTCCTG CGTCCGAAGC
TGCCCGGTAA AAGCGATCAA GGTGGAGAAG AGCTACACCG AGATCATCCC CGAGCGCTGC
ATCGGCTGCG GCAACTGCAT GAGCCACTGC CCCCAGCACG CCAAGGTGAT CGCCGATAAC
GTTGCGGTAA CCAATGCGCA CCTTTCTTCG GGCGAGCCGG TTGTAGCGGT GCTCGGCTGC
TCGTTTCCTT CCTTTTTCCA CCATTGCTCC CCGGGCCAAC TGTCCGCCGG GCTCAGGCGG
CTTGGATTCG TCGAGGTGCA CGAGGGGGCC AGCGGGGTGG AACTTATCGC GGGCGAGTAC
CGCGACGCCA TCGAAAATGC CAAGCTGCCG CTCATTTCCT CCCACTGCCC GGCCGTGGTC
GATCTCGTGG AGCGGCATTA CCCGCAGTTG ATCGAGAACC TGGTGGGGGT GGTGACGCAC
ATGGTGGCCA TGGGGCGCTT CCTGAAAGAG GTCTGGGAGG GGAAGGCCAA GGTCATCTAC
ATCAGCTCGT GCATCGCCGG CAAGTTCGAG GTGCAGGCGG AGCAGACCAA GGGGGCCGTC
GACGTGCTCC TCACCTACCG CGAGCTGGAG TCGATCTTCA AGGAGCGGGG GATCGATCTC
GCCACGCTGG AGGAGGAGCC TTTCGACGGC AAGGAGCCGC ACATGGGAAG GATCTTCCCG
CTGTCGCAAG GTTCCTTCCA GGCCTTCGGC ATTGAGGCCG ACCCGCTCGA CACCGAGGTC
GTCACCGCCG AAGGGGAGGT CAACGTCATG GGGATTATCA AGGACCTCGC GGCGGGGAGG
ATCAGCCCGA AGCTCGTCGA TCTCCGTTTC TGCTACGACG GTTGCATCGG AGGCCCGGGC
CGAAACCAGG CGCTCACCGA ATTCTCCAGA CGCAACCTGG TCATCTCCCA TCACCGAAAG
AGGATCCCCT ATCGCACCTC GCAGGCCTAC CTGGACGCGG CACCGGTGTC GCTGTCGCGT
ACCTTCGCCG ACAAGTACGC CAAGCTCCCC ACCCCCAAGG GGGGGGACGT GAAGAAGATC
CTGCACGCCA CCAACAAGTT CACCCAGAAG GACGAGCTGA ACTGCCGCGC CTGCGGCTAC
CGGACCTGCC GCGAGTACGC CGTCGCCGTG TTCCAGGGAC TTGCCGACCT GGAGATGTGC
CTGCCGCACA ACCTGCAACA GCTGGAGGAG GAGCGCGGGA GGCTGATCGA GAAATACGAA
CTGGCGAAAA GGGAGCTCGA CCGCTACGGC GACGAGTTCA TCGTGGGGAG TGACCGCAAC
ACGCTGGAGG TGCTTGACCA GATCAAGCAG GTGGGGCCTA CGCCAACCAC CGTCCTCGTG
CGCGGCGAGT CCGGGACCGG CAAGGAGCTC GCGGCGCGCG CCATTCACCG CTACTCCAAA
AGAAACGACA AGCCGCTGGT CACGGTCAAC TGCACCACCA TCACCGATTC GCTCCTGGAG
AGCGAACTCT TCGGTCACAA GAAGGGCTCG TTCACCGGCG CCATCATGGA GAAAAAGGGT
CTCTTCGAGG CGGCTCACGG CGGCACCATC TTCCTCGACG AGATCGGGGA CATCACGCCT
AAGCTGCAGG CGGAGTTGTT GCGGGTGCTG GACTTGGGCG AGGTGAGGCC GGTCGGGGGG
ACCGCCGCGA AAAGGGTTGA TATCCGTCTT ATAGCGGCAA CTAATAAATC GCTTGAGGAC
GGGGTCCGCG AAGGTTGGTT CCGCGAGGAC CTCTATTACC GTCTCAACGT CTTCTCCATC
ACCATGCCCC CCTTGCGCGA ACGGGTGGAA TCGATCCCGC AGCTGGCACA CTATTTCCTG
GAAAAGGCGC GCAAGAAACT CAACAAGCAC ATCGACGGTA TCGAGGAACG GGCGGTCAGC
GCCATGGTGA AATACCCCTG GCCCGGCAAC ATCAGGGAGA TGCAGAACGT GATAGAGCGC
GCCGCCGTGC TCACCCACGA CGAGATCATC AAACTGGGGA ACCTCCCTCT CGCCTTCGCC
GAAAGCTACG CCGAAGAGGC CGAGGACGTC ATTGACTTGC GCTCCTTCAA GAAGGAGCGG
GAACCCCACG TGCTGCGGGT CGAGAAGAAG CTGATCCAGC GCTATCTTGC CGACGCGGGG
GGCAATGTGT CAAAAGCGGC ACAACTTGCC AACATCCCGA GGCGCACTTT TTACCGCCTT
TTGGCGAAAC ACGGGCTCAA AGGACGCACG ATAAGGGCGA GGGAGGAAGC CGAGGATTAG
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| Protein sequence | MYPIITITDH CRKCYSCVRS CPVKAIKVEK SYTEIIPERC IGCGNCMSHC PQHAKVIADN
VAVTNAHLSS GEPVVAVLGC SFPSFFHHCS PGQLSAGLRR LGFVEVHEGA SGVELIAGEY
RDAIENAKLP LISSHCPAVV DLVERHYPQL IENLVGVVTH MVAMGRFLKE VWEGKAKVIY
ISSCIAGKFE VQAEQTKGAV DVLLTYRELE SIFKERGIDL ATLEEEPFDG KEPHMGRIFP
LSQGSFQAFG IEADPLDTEV VTAEGEVNVM GIIKDLAAGR ISPKLVDLRF CYDGCIGGPG
RNQALTEFSR RNLVISHHRK RIPYRTSQAY LDAAPVSLSR TFADKYAKLP TPKGGDVKKI
LHATNKFTQK DELNCRACGY RTCREYAVAV FQGLADLEMC LPHNLQQLEE ERGRLIEKYE
LAKRELDRYG DEFIVGSDRN TLEVLDQIKQ VGPTPTTVLV RGESGTGKEL AARAIHRYSK
RNDKPLVTVN CTTITDSLLE SELFGHKKGS FTGAIMEKKG LFEAAHGGTI FLDEIGDITP
KLQAELLRVL DLGEVRPVGG TAAKRVDIRL IAATNKSLED GVREGWFRED LYYRLNVFSI
TMPPLRERVE SIPQLAHYFL EKARKKLNKH IDGIEERAVS AMVKYPWPGN IREMQNVIER
AAVLTHDEII KLGNLPLAFA ESYAEEAEDV IDLRSFKKER EPHVLRVEKK LIQRYLADAG
GNVSKAAQLA NIPRRTFYRL LAKHGLKGRT IRAREEAED
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