Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3880 |
Symbol | ispD |
ID | 8139254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 4466672 |
End bp | 4467367 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644871497 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_003023655 |
Protein GI | 253702466 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCAGGA TTTTCGCGCT GATACCGGCC GCCGGAATGG GCAAAAGGAT GGGTGCCGGC TCCAACAAGC AGTATCTGCT GCTGGACGGC ATGCCGATTC TCGCCCGCAC CGTCGCTGTT TTCGAGTCGG CACCCTTCAT AGACGGGATC TACCTGGTTT CGCCGGAGCA GGAGATCCCG TTTTGCCGCA GCGAGGTGGT CGACCGCTAC CGCTTCACCA AGGTCCGCGC CATCGTCCCC GGCGGGGCCG AGCGGCAGCA CTCGGTCTGC AACGGCCTGA ACGCCATGAG TGACGCAGCT TCCGACGACC TAGTGCTGAT CCACGACGGG GTGCGCCCTT TCGTTTCGCA AGAGATGCTG CAAGCCGCCG CCGACGCTGC CCGGGAACAT GGAGCATCCG TGGTCGCGGT CCCGGTGAAG GACACGGTGA AGGTGGTGAA AGGCGGCGTT ATCGCCGAAA CGCCGCCCCG CGAAAAGCTC TGGCTGGCGC AGACGCCGCA GGCTTTCCGC TACGGCCTGA TCCGCGACGC CCACGCGCGT GCAAAGGCGG AAGGGTATCT GGGAACCGAC GACGCCTCCC TCATCGAGCA TCAGGGGGGA GAGGTGCGCA TCGTCACCGG CGACTACCGC AACATCAAGA TCACGACGCC CGAGGACCTG GTTCTTGCCG AGGCGTTTCT GAAGGGAAAG GGATGA
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Protein sequence | MSRIFALIPA AGMGKRMGAG SNKQYLLLDG MPILARTVAV FESAPFIDGI YLVSPEQEIP FCRSEVVDRY RFTKVRAIVP GGAERQHSVC NGLNAMSDAA SDDLVLIHDG VRPFVSQEML QAAADAAREH GASVVAVPVK DTVKVVKGGV IAETPPREKL WLAQTPQAFR YGLIRDAHAR AKAEGYLGTD DASLIEHQGG EVRIVTGDYR NIKITTPEDL VLAEAFLKGK G
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