| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3879 |
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| Symbol | |
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| ID | 8139253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 4465057 |
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| End bp | 4466463 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644871496 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_003023654 |
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| Protein GI | 253702465 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 0.797755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGAGG GGGTGCTCGT GCAGCAGCTT AAAATGATCC CGAAGGTTGA CCGGGTCCTC
GAGTGGGAGG CCGTGCGCAA GCTTCTGTCC ACCTACCCAA GGGAGCTGGT GCTGCGAGCC
GTCCGCAGCG TGCTGGATAG ACTGCGCTGC GGCGCCCGTG CCGGCGGTCT CGACGATTCC
GCCTTCCTTG AGCCCGCAGT CTGCGCCGCA GTGGCCCGTG AACTAGCCCA ACTCTCCCGG
CCGAGCCTGC AGAGGGTGAT CAACGGCTCC GGCATCGTGA TACACACAAA TCTGGGACGC
TCCATCCTCC CCGAGGCCGC CCGCGACGCC CTCAACACCA TAGCCTTCTC CTATTCGAAC
CTTGAGTTCG ACCTCGAAGC GGGGGCGCGC GGCAGCCGCT ACAGCCACGT GGAGGCGCTC
CTTTGCGAGC TGACCGGGGC CGAGGCCGCC ATCGTGGTCA ACAACAACGC CGCGGCGGTT
CTCTTGTCGC TGAGCTCGAT GGCCTCCGGG CGCGAGGCGG TGGTTTCGCG CGGTGAGCTG
GTGGAGATTG GGGGGTCGTT CCGCATTCCC GAAGTGATGC GACTTTCGGG CGTGACGCTG
AGGGAGGTGG GGACGACGAA CCGGACCCAT CCCAAGGACT ACAGCGGCGC GGTTAACGAG
CAGACCGCGG TGTTTCTCAA GGTGCACTGC AGCAACTTCG CGGTTCTCGG CTTCACCGCC
GAGGTGACCG CACAGGAGTT GGTGGCGCTT GGGGCCGCCG CCGGGGTCCC GGTACTGGCC
GACATGGGAA GCGGCAATCT GGTCGACCTT TCGGGGCGCC TGCCGGTTCC GGAACCGACG
GTTCAGGAGT TCGTGCGCGC GGGGGTCGAC GTCATCACCT TCAGCGGCGA CAAGCTCCTG
GGAGGCCCGC AGGCCGGGAT CATCGTGGGG AAAAAGCCGT TCATCGAGGC GATGAAAAAG
CACCAGCTGC TGCGCGCGCT CAGGATGGAC AAGCTCACCC TGGCGAGCCT GGAGGCGACG
CTCGCCCTGT ACCGGGACGA GATGGTCGCG CTCAAGGAAG TGCCGACACT GAGGATGCTG
ACCGCCACCC TCCCCGACTT GACGGCGCGG GCGAAAAAGA TCAGCGCATT TTTGCGCCGC
CGCACGCCGC AGGGGATCAG CTTCAAGCTG AACGAGGGGT TTTCCCAGGC AGGAGGCGGG
ACGCTGCCGC TGTTGAACCT CCCCAGCATG CTGATCGAGG TCGCGGTGGA GGGACTCTCC
CCCAACGACA TCGAGTCGCG GCTCAGGAAA TCCGAGATCC CGGTCATCGG CAGGATCAAC
AAGAACGCCT TCCTGCTCGA CCCCCGCACC CTGCTGGACG GCGACCTGCC GGACCTCGCC
GCGGCCATCT CCGGGCTGGC AGGGTAG
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| Protein sequence | MQEGVLVQQL KMIPKVDRVL EWEAVRKLLS TYPRELVLRA VRSVLDRLRC GARAGGLDDS
AFLEPAVCAA VARELAQLSR PSLQRVINGS GIVIHTNLGR SILPEAARDA LNTIAFSYSN
LEFDLEAGAR GSRYSHVEAL LCELTGAEAA IVVNNNAAAV LLSLSSMASG REAVVSRGEL
VEIGGSFRIP EVMRLSGVTL REVGTTNRTH PKDYSGAVNE QTAVFLKVHC SNFAVLGFTA
EVTAQELVAL GAAAGVPVLA DMGSGNLVDL SGRLPVPEPT VQEFVRAGVD VITFSGDKLL
GGPQAGIIVG KKPFIEAMKK HQLLRALRMD KLTLASLEAT LALYRDEMVA LKEVPTLRML
TATLPDLTAR AKKISAFLRR RTPQGISFKL NEGFSQAGGG TLPLLNLPSM LIEVAVEGLS
PNDIESRLRK SEIPVIGRIN KNAFLLDPRT LLDGDLPDLA AAISGLAG
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