Gene GM21_3859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3859 
Symbol 
ID8139233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4445475 
End bp4445939 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID644871476 
Productprotein of unknown function DUF163 
Protein accessionYP_003023634 
Protein GI253702445 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.161132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTGA AGCTCCTTTG GGTCGGCAAG ACCCAGGAGA GCTGGGTCAG GACCGGTATC 
GAGGAGTACG CCGGAAGGAT CAGGCGCTAC GCCCCGCTGG AGATCCTGGA GGCCCGGGAG
GAAAAAGGGG CGCAGGCCGC CGCGATGCGG GAGCGGGAAT GCGAGCGCCT GGCGAAGCTG
ATCCCCAAGG GGGGAAGGCT GGTGCTCCTC GACGAGCGGG GGGAGGCGAT GACCTCCCCG
GAGCTTGCCT CCTTCCTCTC CAAAAACCGC GACCAGGGAA CGCAGGACCT GGTCTTCGCC
ATCGGAGGGG CCTATGGCTT CACCGACGCG TTCCGCAGCC AGGCCTTCAA GTCGATATCG
CTTTCCCGCA TGACCCTGAC CCACCAGATG GTGAGGGTCT TCCTGCTGGA ACAGATCTAC
CGCGGCTTCA CCATCATTAA CGGTGAGCCG TATCATCATG AGTAG
 
Protein sequence
MRLKLLWVGK TQESWVRTGI EEYAGRIRRY APLEILEARE EKGAQAAAMR ERECERLAKL 
IPKGGRLVLL DERGEAMTSP ELASFLSKNR DQGTQDLVFA IGGAYGFTDA FRSQAFKSIS
LSRMTLTHQM VRVFLLEQIY RGFTIINGEP YHHE