| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3847 |
|---|
| Symbol | |
|---|
| ID | 8139221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 4430620 |
|---|
| End bp | 4431333 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644871464 |
|---|
| Product | flagellar basal-body rod protein FlgF |
|---|
| Protein accession | YP_003023622 |
|---|
| Protein GI | 253702433 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG4786] Flagellar basal body rod protein |
|---|
| TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.000197153 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCG GCATATACGC GGCCCTTTCC GGGAACCTGT CGGCGCAGCG GCGCCTGGAC
GTCATTTCCA ACAACCTGGC CAACTCCAAC ACCGCCGGTT TCAAGGCGGA CCAGATCCAA
TTCGAAAGCG TGCTGGCCAA TGTCAAAAAT CCGACACAGA CGCCAGTTTT CAGTAACGAC
CGCTACTCCA CCGACTACTC CCCCGGCGCC CTGCAAAGGA CGGAGAACGC GCTCGACCTG
GCGCTGGACG GGGACGGCTT CTTCGTGGTC AACACCCCGC AGGGCCCGGC CTACACCAGG
CAGGGGAACT TCTTCCGCAG CCAGGCCGGC CGGCTGGTCA ACGCCGACGG CTTCGAGGTG
CAGGGAAGCG GCGGTGCCAT CGCCATCGGC GGAGGGAAGG TTGAGGTCTC CGGCAACGGC
GAGGTAGTGG TGAACGGCGC GACCGTGGCC ACCCTCTCCA AGGTGGATTT CCCCAAGCCC
TACCAGCTGA CCAAGATCGG CGGGGGGCTC TTCGTGCCGG CGAACCCGCA GGCGGCGCCG
GCCCCGACCG CAGCCACGGT GAAGCAGGGG TACCTGGAGA GCTCCAACGT CAAGGTGGTG
GTGGAGATGG CGCGCATGAT CGAGGCGAGC CGCTACTTCG AGACCTGCAC CAAGGCGGTG
AAAAGCTACG ACGACATGAC CGCCAAGGCG GTCAACGAAC TGGGCAGGAT CTAG
|
|---|
| Protein sequence | MNSGIYAALS GNLSAQRRLD VISNNLANSN TAGFKADQIQ FESVLANVKN PTQTPVFSND
RYSTDYSPGA LQRTENALDL ALDGDGFFVV NTPQGPAYTR QGNFFRSQAG RLVNADGFEV
QGSGGAIAIG GGKVEVSGNG EVVVNGATVA TLSKVDFPKP YQLTKIGGGL FVPANPQAAP
APTAATVKQG YLESSNVKVV VEMARMIEAS RYFETCTKAV KSYDDMTAKA VNELGRI
|
|---|
| |