| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3824 |
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| Symbol | |
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| ID | 8139198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 4404243 |
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| End bp | 4407563 |
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| Gene Length | 3321 bp |
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| Protein Length | 1106 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644871441 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003023599 |
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| Protein GI | 253702410 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.138221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGCGC CCGAGAGCGC CCGAGAGCTT TTCCTGGCGG GGAACGCGCT TTTCGGCGCG
GGGGACCTCT CCGGAGCGGC CGAGTGCTAC CGGCGCGCCC TGCAGCTCGA TCCCGGCTAC
GCCGAGGCGT GCTTCAACCT GGGGTGCGCC CTGGACCGCC TGTCCGGCCC CGCAGAGGCG
CTGCCCCACC TCGCGCGCGC CGCGGAGCTA TCGCCCGAGT GGAGCCGGGC CCGCGGCAGC
CTGGGTTTCG CCCTGGCCCG CCTCGGGCGC ATGGGAGAGG CGGCGGGGGA GCTCGCCGCG
GCCGTCCGGC TCGATCCCGG CGACCCCGGT CTCTCGAACA ACCTGGGGCT CGCCCTCTCG
GCGCTTTCCC GCGGCGAGGA GGCGAGGGAT GCATTCGAGG AGGCGATCCG CCTCGACCCG
CTCTACGCCG AGCCCCACAA CAACCTCTCC ATCCTCTTCG AGCGTTTCGG CGAGAGCGCC
CACGCCATAG CGGCGGCACT TGAGGCGCTC CGGCTGAAGC CGGAATTCCC CGAGGCGCAC
CTGAACCTCG CCAACGCCCT CAAGTCGCAG GGGCGGCACC AGGAGGCGAT CGCCCACTAC
CGGGAGGCGC TGAGACTTCG TCCCGACTAC CGCGAGGCGG AAAGCTCGCT GCTCTTCGCG
CTCCTTTACC CCGCGCACAC CCCCGAGGAG GAGCTCTTCG CCGAGCACGC AGCCTTCGGG
GCACGCTGCC GTTTCTCAGC ACCCAGGCAC GTGAACGACC CGGACCCGGA GCGCCCTCTG
AAGCTGGGTT ATCTCTCCGC CGACTTCCGG GAGCATGCCG TGGCCCGCTT CATCGAGCCG
GTGCTGGCCC ACCACGACCG CTCCCGGTTC CGCATCTATT GCTACTCGAA CGTCTCGGCC
CCCGACCAAA GAAGCGAGAG GCTCGCGGCT CTCGCCGACT GCTTCCGGAG CATCGCCGGG
ATGACGGACC AAAAGGTCGA GGAGCTGGTG CGCGCGGACG GGATCGACAT CCTGGTCGAC
CTCTCCGGGC ACAGCGCGGG AAACCGCCTC CCGGTCTTCG CCCGCAGGCC CGCCCCGGTG
CAGGTCACCT GGCTCGGCTA CCCCTTCAGC ACCGGGCTGG AGGCGATCGA CTATCGCATC
ACCGACCCGG TCTGCGACCC CCCGGGCGAG ACCGAGCGCT ACCACAGCGA GGAGCTCTTG
CGGCTCCCCG GGACCTTCTC CTGCTTTCTT CCCCCCGATG ACGCGCCCCC GCCGGTGGGC
GCACCGCTTT CAAAAAACGG CAGGGTCACC TTCGGCTCCT TCAACAACCC GGCGAAGATC
ACCCCCGAGA CGGTGCTCCT TTGGTCCGGG GTGCTGCGCG CGGTCCCGGG GTCGCATCTC
CTCTTGAAGG GGTATTCGCT CGCCTGCGCC GAGACGAGGC TCCGCCTTGA GGAGGCCTTC
GCCGGGCACG GCATCGAGCG GGAGCGGCTG GAGCTTATGG GGAACACCCC CAGCTACCGC
GACCACCTGG CGCTCTACGA TCGGGTCGAC ATCGCCCTGG ACAGCTACCC CTACAACGGC
ACCACCACGA GCTGCGAGGC GCTCTGGATG GGGGTCCCCG TGGTGACGCT GGCGGGCTCC
TCGCACCGCT CGCGGGTGGG CGCCTCTCTT TTGCAGGCGC TGGGGCTTGA GGGGCTGGTG
GCGCACGAGG CGCGGAAGTT CGTGGCGCTC GCCGCTGCTC TGGCCGGGGA TCCGGAGAGG
CTCTCAGGCC TCAGAAGCAC GCTGCGCCGG ACCATGGCCG CCTCCCCCCT CACCGACGGC
GCCTCCTTCA CCCGTCACCT GGAAAAGGCC TGGCGCGACG TCTGGGCGAG GTGGTGCCGC
AGCCACCCGG CCCAGGCGCC GGACCCCGCG GTGCAGGGGG CGCAATACCT GCAGCACGGC
AGGCTCGACC GGGCGCTCTC GCAATTCCTG ATACCTTTGC GCGGCGGGGA GAGGAGCACC
CTCGGGGGGA TCCAGGAGGC GCTGCGCCTG CAGCTCGCGG CGGACCAGGC GCGCGCGCTG
GCTCTCGACG ACCCGCTGGC CTTGCGCGAG GAGGAGACGG AGCATTTGGG CTGCGAGACC
CTGGCCGAGA CGGCCGAGCT CCTGGTTGCC GCCGGCTTCG TGACGCCGGC AGAGCTCATC
TGCCGCTACC TGGGCGACCG CGGCTACCTG AGCCCCCGGG TGAGCCGTAC CCTCGCCGAG
GTGGCGCTCG CCATAGGGAA GCCCGAGGTC GCGGTGCGCG AGTTCGAACG CGCCCAGGCC
GCGGGGGACC GCTCCCGCGC CACCCGCATC AAGCTGGTGA AGGCGCAGGA GGCTGAGCGG
CTCTCCCCCC CTCCGGCGCG GGTAGAGCGT TTCCTTCTCA TCAAGGCCTG GGGGTACGGC
TTCTGGAGCG ACGTGAACAT GCTTTTGGGG CAGTGCCTTT TGGCGGAGAT CACCGGGCGG
GTCCCGGTGG TGCACTGGGG GGGGAACTCC CTTTTCTCCG ACGATCCCGG GCGAAACGCC
TTTTCGAGCT TCTTCCTCCC CTTCAACGGC ACCGGCATCG GCGAGCTCGC CGCCAAGGCG
CGTAGCATCT ATCCCCCCAA GTGGAACCGG GAGAACCTCC TTTTGGACGA GCTCAACAAG
GAGGAGGGGC CCTGGTCCCG CTTTTCCTCC CTCTACGCCC TGGAGCGCGG CGAGGAGGTG
GTGGTCGGGG ACTTCCATTA CGGCGTGAAC GATTTCATCC CCTGGATCCC GCCGGGGCAC
CCTCTCTACG GGCTCGACCC GGACGCGCTC CACCTGCTGC TTTACCGGCG CTACCTCAGG
CCGCGCCCTG AGCTGGAGCT GCGCGCCGAG ACCTTCTTCG ACCGGGAATT CTCGGGCCGC
CCCGTGCTGG CGCTCCACGT GCGCGGGGGG GACAAGGGGG GGGAGGATCC CGGCCTTCAC
CGGCTGAACG CCCTCTACCA CCCGCGGATC GAGCGCTTCC TGGGCGAGGA GCGGGAAGGG
CGCCTTTTCC TTCTCACCGA CGACGACAAC CTCTTGGCCT CGTACCGGGA GCGCTACGGC
GACCGCCTCT CCCACACCGC CTCGACCCGC ACCGGCTCCA GCCTCGGGGT GCATCACCAG
GAACAGGCGG ACCGCAGGGC GCTGGGGGAG GAGGTGCTGG TCGACGCGCT GATCGCCGCG
CGCTGCCGCC TTTTCCTCGG CAACGGCTTT TCCAACGTCT CCCTCGCGGT GGCCCAGATG
AGGCGCTGGG AGCGGGGGAG CTGCGTCCTT TTCGGCGCCC GGCTGGACCG GGTCCGGCAG
ATGACCCTCT ACAGGAGCTG A
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| Protein sequence | MTAPESAREL FLAGNALFGA GDLSGAAECY RRALQLDPGY AEACFNLGCA LDRLSGPAEA
LPHLARAAEL SPEWSRARGS LGFALARLGR MGEAAGELAA AVRLDPGDPG LSNNLGLALS
ALSRGEEARD AFEEAIRLDP LYAEPHNNLS ILFERFGESA HAIAAALEAL RLKPEFPEAH
LNLANALKSQ GRHQEAIAHY REALRLRPDY REAESSLLFA LLYPAHTPEE ELFAEHAAFG
ARCRFSAPRH VNDPDPERPL KLGYLSADFR EHAVARFIEP VLAHHDRSRF RIYCYSNVSA
PDQRSERLAA LADCFRSIAG MTDQKVEELV RADGIDILVD LSGHSAGNRL PVFARRPAPV
QVTWLGYPFS TGLEAIDYRI TDPVCDPPGE TERYHSEELL RLPGTFSCFL PPDDAPPPVG
APLSKNGRVT FGSFNNPAKI TPETVLLWSG VLRAVPGSHL LLKGYSLACA ETRLRLEEAF
AGHGIERERL ELMGNTPSYR DHLALYDRVD IALDSYPYNG TTTSCEALWM GVPVVTLAGS
SHRSRVGASL LQALGLEGLV AHEARKFVAL AAALAGDPER LSGLRSTLRR TMAASPLTDG
ASFTRHLEKA WRDVWARWCR SHPAQAPDPA VQGAQYLQHG RLDRALSQFL IPLRGGERST
LGGIQEALRL QLAADQARAL ALDDPLALRE EETEHLGCET LAETAELLVA AGFVTPAELI
CRYLGDRGYL SPRVSRTLAE VALAIGKPEV AVREFERAQA AGDRSRATRI KLVKAQEAER
LSPPPARVER FLLIKAWGYG FWSDVNMLLG QCLLAEITGR VPVVHWGGNS LFSDDPGRNA
FSSFFLPFNG TGIGELAAKA RSIYPPKWNR ENLLLDELNK EEGPWSRFSS LYALERGEEV
VVGDFHYGVN DFIPWIPPGH PLYGLDPDAL HLLLYRRYLR PRPELELRAE TFFDREFSGR
PVLALHVRGG DKGGEDPGLH RLNALYHPRI ERFLGEEREG RLFLLTDDDN LLASYRERYG
DRLSHTASTR TGSSLGVHHQ EQADRRALGE EVLVDALIAA RCRLFLGNGF SNVSLAVAQM
RRWERGSCVL FGARLDRVRQ MTLYRS
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