| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3820 |
|---|
| Symbol | |
|---|
| ID | 8139194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 4391876 |
|---|
| End bp | 4393423 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644871437 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003023595 |
|---|
| Protein GI | 253702406 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 90 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATT CGAGCCTTGA CGAAATCTAC AAGTACGACT CGCTTTACGG CGCCAATCCG
GATTACGGGA TCACCCAGGA CAACGAGCCA AGGTTCGCCA CGACGCTGCG GTATCTCGCC
TCCGTCGGAG GCATCAAGAC GGTGCTCGAC GCCGGGGTAG GAAGGGGCGG GTTCTACTAC
CGTTCGAGAC AGATCTACGA CACCTATGGC ATTGAGCCGA GCAAGGTGGC CATCGGCAGG
TTCCACGCAG GAGACGACAG GATCAAGAAC CTGTTCATTC AGGAGGCTAG GGAGCATTAC
CCGGAGAACT TCTTCGACGC GGTGATCTGC CTCGACGTCC TGGAGCACAT CCCGGAGCAG
GACATCGACG CCTGCTTCGA GTCGATGAAA AAGATCGGCA AGCGTTACTT CATCTTCTCC
ATTGCCCACC ACGAAGACAT CATCGACGGG CTGGACCTGC ACATAACAGA CCTCGATTAC
TGGCAATGGG AGGAGAAGTT GCGCAGACAC TTCGACATCG CAGAAGTGAC CAGTATCCAC
GATGACCGTG CCCGCATCTA CCTGCTGGAA AAGAAGGAGC AGCCGACACA GGCGACTGGG
GAATACCCGA GCTACCTCAC CATACGCCTG ACCAGCAGAT GCAATTTGGA ATGCTTCATC
TGCGACCGCG ACTCAGTAGA GCGCGCGGAC TTCGACTTCG AGCTCCTGGG GCGGCTTGCC
GAGCCGATCA GGCGCGCCTC CATCGTCGAC CTCACTGGCG TCGGAGAGCC GTTTCTCTAC
CCAAAGTTCA AGCAGGCGCT CGACTACATC TGCTCGCTGA ACCGCAACGC GTCCCTGATC
AACCTCACCT CCAACGGGAC GGTACTTTCC AGGGAGATAG CCGGTATGTT GAACGGCCGC
CTGAACGGGC TGGTGATCTC CCTGAACGCG GCCACTGAGG CCACCTATGA AAGGGATATG
AAGCACGGCA ACTTCAAAAG GACCCTGGAA AGGATAGGGG GGTTCGTCAG CGCCCTCAAT
CCAGCGGAGC GAGTGAAGCT TGACCTGCAC TTCGTGGCCC ATGCCGGAAA CTACCAGGAA
ATCCCTGATT TCGTCTCGCT GGCGGACCAA CTCGGCATCA AGAACGTTTC CGTTTGGCCC
TTCCTGGTCA CCTACCCCGA CCAGATCCCC AACACGCTTT TGAACGTGAA GAAGGAGTAC
AACAGCGTCA TCGGCTACGC GAGGATTCTC GCCAAGAAAC TTGAGGTAAA GCTGAGTGCG
CGCCTGTTCG GGGAGGAAAA GCCGTCTTCC TACCTGAACT GCCCCCAGCC GTTTACGGTC
TGCAATATCC AGGAGGACGG AAACGTTGCC CCTTGCTGCA ACGCCGGCAA AATCACCTTC
GGCAACATCA GGGAATCAGA CTTCGAGAGC ATCTGGTTCG GCAAGAAATT CCAGGATTTT
CGCGAGAACC GCCACCAAGT CGCCTGCCAG AGGTGCAGCA CCTACTACCC GCTCGACACG
CTGAACGCAT ACCTGCAGGC GCATTTCTAT GAAAGATACG AAGAGTGA
|
|---|
| Protein sequence | MKNSSLDEIY KYDSLYGANP DYGITQDNEP RFATTLRYLA SVGGIKTVLD AGVGRGGFYY
RSRQIYDTYG IEPSKVAIGR FHAGDDRIKN LFIQEAREHY PENFFDAVIC LDVLEHIPEQ
DIDACFESMK KIGKRYFIFS IAHHEDIIDG LDLHITDLDY WQWEEKLRRH FDIAEVTSIH
DDRARIYLLE KKEQPTQATG EYPSYLTIRL TSRCNLECFI CDRDSVERAD FDFELLGRLA
EPIRRASIVD LTGVGEPFLY PKFKQALDYI CSLNRNASLI NLTSNGTVLS REIAGMLNGR
LNGLVISLNA ATEATYERDM KHGNFKRTLE RIGGFVSALN PAERVKLDLH FVAHAGNYQE
IPDFVSLADQ LGIKNVSVWP FLVTYPDQIP NTLLNVKKEY NSVIGYARIL AKKLEVKLSA
RLFGEEKPSS YLNCPQPFTV CNIQEDGNVA PCCNAGKITF GNIRESDFES IWFGKKFQDF
RENRHQVACQ RCSTYYPLDT LNAYLQAHFY ERYEE
|
|---|
| |