| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3785 |
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| Symbol | |
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| ID | 8139159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 4358282 |
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| End bp | 4360081 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644871404 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_003023562 |
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| Protein GI | 253702373 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 110 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCAT CCCCCATACA GATTCTCAAC GACGTGTTCG GCTTCAAGTC GTTCCGGTCG
CCGCAGCATG AGATCGTGGA AACGGTTCTC TCCGGCAGGG ACGCCTTCGT CCTCATGCCG
ACCGGCGGCG GCAAATCGCT CTGCTACCAG ATCCCGGCCC TCTGCTTTCC CGGCACAGCC
TTGGTGGTCT CCCCCCTCAT CTCGCTGATG AAGGACCAGG TCGACGCCCT GCGCGAGAAC
GGCATCTCCG CCGCGTGCTA CAACTCTGCG CTGGGAGAGG CGGAGGCGCG CCGGGTGCTG
GCCCAACTGC ACGCAGGCGA GCTGAAGCTC CTCTACGTCG CGCCCGAGCG GCTTTTGAGC
GACGGCTTCC TGGAAAGGAT CAAGCCGCTT TCCATCTCCC TCTTCGCCAT CGACGAGGCG
CACTGCGTCT CGCAGTGGGG GCACGACTTC CGTCCCGAGT ACGCCCAGCT TGGCGTCTTG
CGCGAGATAT TCCCCGAGAT ACCGATGATC GCGCTTACCG CGACGGCCGA CGCCCAGACC
CGGGGAGACA TACTTTCCCG GCTCGGGCTT CAGGGGGCTA CCTGCTACTG CGCCGGTTTC
GATCGCCCCA ACATCCGTTA CAGCGTCATC GACAAGAATA AGCCCTTCAA CCAGCTCACC
GGCTTCTTGT CGAGCCGCAA GGACGAGGCG GGGATAGTGT ATGCCCTGTC CCGGAAGCGG
GTGGAGGAGG TGGCCAGGAA GCTTTGCGCA GCCGGGATCA AGGCGGCCGC CTATCACGCC
GGCCTCCCCG ATAAGGAGCG GCACCGGGTC CAGGAGGCCT TCCTCAAGGA CGACATCAAG
ATCGTGGTGG CGACGGTCGC CTTCGGCATG GGGATAGACA AGTCCAACGT CCGCTTCGTG
GTGCACTACG ACATGCCCAA GAGCATCGAG AGCTACTATC AGGAGACCGG GCGTGCCGGC
CGGGACGGGC TTCCCGCAGA CGCGCTCCTC TTGTTCGGTT ACGGCGACGT AGCCGTGGCC
CGCGGACTCA TCGGCAACGG CGGCAACGCG GAGCAAAACA GGATCGAGCT GCACAAGCTC
AACTGCATGA CCGGGTTCGC CGAGGCCCAG ACCTGCCGGC GCCGGGTGCT GCTCGGATAT
TTCGGGGACC GGCTGGAGCA GGACTGCGGC AACTGCGACA TCTGCGAGAG CCCGCCCGAG
CGCTTCGACG CCACCGAGGA TGCCCAGAAG GCCCTCTCCT GCGTCTACCG AGTCGGGCAG
CGGTTCGGGA TGGGGCACGT CATCGACGTT TTGCGCGGTT CGCAGAACCA CCGGATCCAG
GAGCTGAAAC ACGACCAGCT TTCCACCTTC GGCATCGGAA AGCAACACTC CCAGGAGTTC
TGGGGCAACC TGCTGCGCCA ATTGATCCAC CTGGGGTATC TGGAGCAGGA CCTGGCGAAT
TTCTCGGTCT TGAAGCTGAC CGAGGGGGCG CGCCCGCTTT TGAGGGGGGA GGTTCGGTTG
GAGCTAGCCA AGCCGCGCGA CACCAAGGTG GTGGAGAAGA AGTCGGCCGC CAAAAAGCCG
AGTTACGACG GCGTGCTGTT CCAGGAGCTG CGTGAGCTAA GGAAGGGGAT CGCGGACGAG
CAGCAGGTGC CGCCCTTCGT GGTGTTCGCC GACGCCACGC TCGCCGAGAT GGCGGCACAG
ATGCCCAAGG ACAAGTGGGA GTTGCTGAAG ATAACCGGGG TGGGGCAGCA CAAGATGGCC
CGCTACGGAG ACGCCTTCCT GCGGGTGATC AGGGAACATC TGGAAAAGGC GGAGAACTGA
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| Protein sequence | MPASPIQILN DVFGFKSFRS PQHEIVETVL SGRDAFVLMP TGGGKSLCYQ IPALCFPGTA
LVVSPLISLM KDQVDALREN GISAACYNSA LGEAEARRVL AQLHAGELKL LYVAPERLLS
DGFLERIKPL SISLFAIDEA HCVSQWGHDF RPEYAQLGVL REIFPEIPMI ALTATADAQT
RGDILSRLGL QGATCYCAGF DRPNIRYSVI DKNKPFNQLT GFLSSRKDEA GIVYALSRKR
VEEVARKLCA AGIKAAAYHA GLPDKERHRV QEAFLKDDIK IVVATVAFGM GIDKSNVRFV
VHYDMPKSIE SYYQETGRAG RDGLPADALL LFGYGDVAVA RGLIGNGGNA EQNRIELHKL
NCMTGFAEAQ TCRRRVLLGY FGDRLEQDCG NCDICESPPE RFDATEDAQK ALSCVYRVGQ
RFGMGHVIDV LRGSQNHRIQ ELKHDQLSTF GIGKQHSQEF WGNLLRQLIH LGYLEQDLAN
FSVLKLTEGA RPLLRGEVRL ELAKPRDTKV VEKKSAAKKP SYDGVLFQEL RELRKGIADE
QQVPPFVVFA DATLAEMAAQ MPKDKWELLK ITGVGQHKMA RYGDAFLRVI REHLEKAEN
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