| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3783 |
|---|
| Symbol | |
|---|
| ID | 8139157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 4355967 |
|---|
| End bp | 4356992 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644871402 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_003023560 |
|---|
| Protein GI | 253702371 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1230] Co/Zn/Cd efflux system component |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 104 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGCCC ACGCCGACAC CCATCTGGAC CAGAGCATCA CGGGGCGCTT AAAGTACGCC
ATAATCCTTA CCACTGTCAC GCTCGTCGCC GAACTGGCGG GGGGGCTTTG GACCAACTCC
CTGGCCCTTC TCTCCGATGC GGCGCACGTC TTCCTCGACC TTTTCGCGCT GCTTCTTTCC
CTTGGAGCCA TCAAGCTCGC CTCCTACCCG GTCAGCGACA CCCGCACCTT CGGCTGGCAT
CGCATGGAGG TTTTCGCCTC CTTCATAAAC GGTAGCACCG TCTTTCTCAT CGCCGGGATC
ATCTGCTACG AGGCGGTGGT CCGCTTCATC CATCCCGAAG AAGTGAAGAG CCTGGAGATG
CTGATCATCG CCTTCGTCGG TCTGGTGATG AACCTGATCT CGGCGGGGGC GCTCCACTCG
CACTCGCACG ACGACCTGAA CGTGCACAGC GCGTTTCTGC ACGTGATCGG CGACGCAGCC
GCCTCGGTCG GCGTGATCAT CGGCGGCATC ATCATGTACT TCACCAACTG GTACCTGCTC
GATGCACTGA TCTCCATCGG CATCGGCTTC ATCATCTTCT GGGGTTCGTG GCGCGTGATG
CGCGAGGCAG TGCATATCCT TTTGGAAGGG GTTCCCCGCG GCATCGAGAT GGAACAGGTT
TCGGCCGCTA TCCTGGAAGT CGAAGGGGTG GAAGAGGTCC ATCACGTCAA CATCTGGACC
ATCTGCTCGC ACATCCTGGC GCTGTCCGGT CACATCGTGG TTCCCCCCAC TTTTAAAGGC
GACCATGGCG GCATCCTGAG GAGGATCGAG GAGCGGCTTT TCGAACGCTT CCACATCTCC
CACACCACAC TCCAGCTGGA AACCAGCCGC TGCACCGAGG TAGACGGGGC GAAGCAGTTC
CGCCACCGCC CGCGCGCCGC GTCTCTGGCG CACGCCCATG CCCATCCGCA CCACCACCCC
CACGGCAGCT GCCAGGGGGG GCATCACCAC CACGATCACA CACATCAACC CCCGGACGGT
AGATAA
|
|---|
| Protein sequence | MHAHADTHLD QSITGRLKYA IILTTVTLVA ELAGGLWTNS LALLSDAAHV FLDLFALLLS
LGAIKLASYP VSDTRTFGWH RMEVFASFIN GSTVFLIAGI ICYEAVVRFI HPEEVKSLEM
LIIAFVGLVM NLISAGALHS HSHDDLNVHS AFLHVIGDAA ASVGVIIGGI IMYFTNWYLL
DALISIGIGF IIFWGSWRVM REAVHILLEG VPRGIEMEQV SAAILEVEGV EEVHHVNIWT
ICSHILALSG HIVVPPTFKG DHGGILRRIE ERLFERFHIS HTTLQLETSR CTEVDGAKQF
RHRPRAASLA HAHAHPHHHP HGSCQGGHHH HDHTHQPPDG R
|
|---|
| |