Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3738 |
Symbol | alaS |
ID | 8139112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 4306605 |
End bp | 4309232 |
Gene Length | 2628 bp |
Protein Length | 875 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644871357 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_003023515 |
Protein GI | 253702326 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 127 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGGCA AAGAGATCCG GGCTCAGTTC TTCAACTTCT TTCAGAAAAA AGGGCATGCC CTTGTGGAGA GCTCGAACCT CATCCCACGC AACGACCCTA CCCTCCTCTT CACCAACGCC GGGATGAACC AGTTCAAGGA CGTCTTCCTC GGCATGGAGA AAAGGGAGTA CCTGAGGGCG GTCTCCTCCC AGAAATGCGT GCGCGCCGGC GGCAAGCACA ACGACCTGGA AAACGTGGGG CGCACCGCCA GGCACCACAC CTTCTTCGAG ATGCTGGGGA ACTTCTCCTT CGGCGACTAC TTCAAGAAGG AGGCGATCGG CTTCGCCTGG GAGTTCCTGA CCAAGGAACT CGGCCTCTCC AAGGACCGCC TCTACGTCAC CGTCTACACC GACGACGACG AGGCGGCCGA CATCTGGCAC AACCAGGAAG GGGTGCCGCG CGAGCGCATC TACCGCTTCG GCGAGAAGGA CAACTTCTGG TCCATGGGCG ACACCGGCCC CTGCGGCCCC TGCACCGAGA TCTTCTGGGA CAACGGCCCG GGAACCGGCT GCGGCAGCCC CGACTGCGCG GTAGGCTGCG ACTGCGACCG CTACATGGAG ATCTGGAACA ACGTCTTCAT GCAGTTCAAC CGCGGCAAGG ACGGCGTGCT GGCCCCGCTC CCCAAACCTT CCGTCGACAC CGGCATGGGC CTTGAGCGCA TCTCGGCCGT CATGCAGGGG GTCACCTCCA ACTACGACAC CGACCTTTTG CAGGGAATCA TCCGCCACAT CGAGAAGGTC TCCGGGAAGA AGTACCGGGA CGACGAGAGG GACGACGTCT CCATGCGCGT CATCGCCGAC CACGCCCGCG CCGTCACCTT CCTGATCTGC GACGGCGTCC TTCCCAGCAA CGAGGGACGC GGCTACGTGC TCAGGCGCAT CATGCGCCGC GCCGCCCGCC ACGCGAAGAT GCTGGGAATC GCCGAGCCGG TGCTCTTCCG GGTCGTCGAC GCGGTGAACA TGATGATGTC CGACGCCTAC CCGGAGCTTC TGGAGCGCGA GCAGTACGTG AAGAAGGTGA TCCTGGCCGA GGAGGAGCGC TTCATCGAGA CGCTCGACCG CGGCCTCGCC ATCTTGAACG AGGAGACGGC GGCGCTCAGG GCCAAGGGGG AGAAGGTCAT CTCCGGCGAG ATCATCTTCA AGCTCTACGA CACCTTCGGC TTCCCGGTCG ATCTCACCGC CGACATCGTC GAGTCCGAAG GGTTCACCCT CGACGAGGAC GGCTTCGCCC TCTGCATGGA GAAGCAGCGC GTCAAAGCGA GGGAGAACTG GAAGGGATCC GGCGAGCAGG GGCTGGCCGA CATCTACAAG GAGCTGCACG GCACCGGCAT CACCACCGAC TTTTTGGGCT ACAGCGAGCA GACCGCCTTC TCCACCATCA GCGCCATCGT CAAGGGGGGG ACCCTGGTCG AGGAGGCCGG CGCCGGCGAA GAGGTCGAGA TCGTCACCGC GGCGACGCCG TTCTACGGCG AGTCGGGGGG GCAGGCCGGC GACACCGGAA CCATCTCCAC CGGCTCCGGC CACGTCGAGG TGACCGGCTC CACCCGCCCC TTCACCGATC TCATCGTGCA CCGAGGCCGC GTGGTCTCCG GCGCCGTCAG AACCGGCGAG GCGGCGGACC TGAAGATCAC GGTCGCTCAC CGCGCCGCTA CCGCCAGAAA CCACACCGCG ACCCACCTTT TGCAGGCGGC GCTCCGGGAG GTGCTGGGCG AGCACGTGAA GCAGGCAGGC TCCCTGGTGA CCCCGGACAG GCTCCGCTTC GACTTCACCC ACTTCACCCC GATGACCCAG GAAGAGATCC GCAGGGTCGA GATCCTGGTG AACGGCCACA TCATGGGGAA CTCCCCGGTG GAGGCCCGCG AGATGCCGGC GACGGACGCG CTTGCCGCGG GCGCCACCGC CCTTTTCGGC GAGAAGTACG GCGACGTGGT CCGCGTGGTC AAGGTAGGCG AGGTCTCAAG CGAACTCTGC GGCGGCACCC ACGTCCACGG CGCCGGCGAG ATCGGCTTCT TCAAGATCAT CTCCGAGGCG GGGATCGCCG CCGGGGTTAG GAGGATCGAG GCCCAGACCG GCAGCGGCGC CCTGGCCGTA GTGCATGGGA TGGAGGACGA GCAGCGCGGC ATCGCGACCC TTCTGAAGGC GGAAGGGGGG ACCGTCCTGG ACAAGGTCGA GAAACTGGTG GCCGGCCAGC GCGAGCTGCA AAAGGAGCTC GAAACGCTGC AGGCGCGCCT GAACGCCTCC AAGTCCGCCG ACCTGATCCA GCAGGTGCGC GAGCAAAACG GCGTGAAGAT CCTGTCGGTG AAGGTCGAAG GGGACGCCAA GGGGTTGAGG GAACTCTCCG ACACGCTGAA GCAGCGCATC GGCTCCGGCA TCATCGTCCT TGGGACCAGC GACGCGGCGA GGGCGAACCT CCTGGTGGCG GTGACGGCCG ACCTCGCCGG GCGCTGGAAG GCGGGAGACA TCATCAAGGC CATCGCCCCG ATAGTCGGGG GCAACGGCGG AGGAAAGCCC GAGCTGGCGC AGGCGGGAGG CTCGAAGCCC GAGCACCTGG CCGAGGCGTT AGAGGCGGTG TACCAGATAG TGGGGTAA
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Protein sequence | MTGKEIRAQF FNFFQKKGHA LVESSNLIPR NDPTLLFTNA GMNQFKDVFL GMEKREYLRA VSSQKCVRAG GKHNDLENVG RTARHHTFFE MLGNFSFGDY FKKEAIGFAW EFLTKELGLS KDRLYVTVYT DDDEAADIWH NQEGVPRERI YRFGEKDNFW SMGDTGPCGP CTEIFWDNGP GTGCGSPDCA VGCDCDRYME IWNNVFMQFN RGKDGVLAPL PKPSVDTGMG LERISAVMQG VTSNYDTDLL QGIIRHIEKV SGKKYRDDER DDVSMRVIAD HARAVTFLIC DGVLPSNEGR GYVLRRIMRR AARHAKMLGI AEPVLFRVVD AVNMMMSDAY PELLEREQYV KKVILAEEER FIETLDRGLA ILNEETAALR AKGEKVISGE IIFKLYDTFG FPVDLTADIV ESEGFTLDED GFALCMEKQR VKARENWKGS GEQGLADIYK ELHGTGITTD FLGYSEQTAF STISAIVKGG TLVEEAGAGE EVEIVTAATP FYGESGGQAG DTGTISTGSG HVEVTGSTRP FTDLIVHRGR VVSGAVRTGE AADLKITVAH RAATARNHTA THLLQAALRE VLGEHVKQAG SLVTPDRLRF DFTHFTPMTQ EEIRRVEILV NGHIMGNSPV EAREMPATDA LAAGATALFG EKYGDVVRVV KVGEVSSELC GGTHVHGAGE IGFFKIISEA GIAAGVRRIE AQTGSGALAV VHGMEDEQRG IATLLKAEGG TVLDKVEKLV AGQRELQKEL ETLQARLNAS KSADLIQQVR EQNGVKILSV KVEGDAKGLR ELSDTLKQRI GSGIIVLGTS DAARANLLVA VTADLAGRWK AGDIIKAIAP IVGGNGGGKP ELAQAGGSKP EHLAEALEAV YQIVG
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