Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3722 |
Symbol | |
ID | 8139096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 4287408 |
End bp | 4289945 |
Gene Length | 2538 bp |
Protein Length | 845 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644871341 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_003023499 |
Protein GI | 253702310 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGG CTGACGCCAA ACAAAGAAGA GTCGAGACGA TAAGAATCGT CGGCATCTAC GCCATCTTCG GCCTGGCCTG GATCTACGGG TCGGACCGGG TCGTGGACTG GATGTTCGAA GACCGCGCGC TGCTGCTCCG GATCGCCGTC GCCAAAGGCT TCCTCTTCAT ACTCTGCACC GCGGCGCTCC TTTTTTTCCT GATCAGCCGC TATCTCGACA GGCTCCGCGC CGCCGAACGG GAGCGGCTCG AAGTCCTGGA CAATTACCGG ACCATCTTCA ACGCCACCAA CGAAGCCATC TTCCTCCATG ACATCGACAG CGGCAGCATC CTCGACGTGA ACCAGCGGGT GCTGGAGATG TACGGCTATA CGCGCGAGGA GGCGCTGGCC GGCGAGATCG GCATGTTTTC CGCGGGGAGC GCCCCCTATT CCCAGACCGA GGCGGTCGCC AAGCTGCGCA AAGCGGCCGA CGCTGGACCG CAGGTATTCC AATGGCTCTC CAAAAAGAAA AACGGGGAAC AGTTTTGGGC CGAGGTGTCG CTGAAAAGGA TCACCACCCG GGGGAAGCTC GCCATCATCG CCGTGGTCCG CGACGTGACC GAACGCAAGA GGCAGGAGGA CGCCCTCAAG GAGAAAAACG CCCACCTGCG CTTCTTCTTC GAGTACGCGC CGGCCTCCCT GGCCATGTTC GACCGCAAGA TGCGCTATAT GCAGGTGAGC CGCCGCTGGC AGAGCATGTA CGGGCTCGCC GACCGCAACC TGATCGGGCT GTCGCACTAC GATGTCTTTC CCGAGATTAC CGAGCGCTGG AAGGAGTTGC ACCGGCGCGG GCTGGCGGGG GAGATCATCC GGGAGGAGGC GGATCGGTTC GTGCGCGCCG ACGGAACGGT GCAGTGGGTG CGCTGGGAAA TCCGCCCCTG GTACGAGGCG GTGGAGCGGG TTGGCGGCAT CGTCATCTTC ACCGAAGACA TAACCGAGCG CAAACTGATC GAGGACGCCT TGAGCGCCAA CGAGCGCTTC CTGCGGATGC TGACCGACCA GCTCCCGGGC ATGGTCGGCT ACTGGGACAG CGAGCTGCGC TGCACCTTCG CCAACAAGGC CTACCAGGAG TGGTTCGGCA AGAGCCCGGC GCAGATGAAT GGGATCACGC TGCCGGAACT GCTGGGGGAA GAACTCTTCG CGCAAAACGA GCCTTACGTG CGGCGCGCCC TGGCGGGCGA ACCGCAGCGC TTCGAAAGGA CCCTGGTGAA GCCGGGGGTA GAGAAAAAGT ACACCTGGGC GCACTACATC CCGGACAAGG TGGGGGGCGT CACCAAGGGG TTCTACGTCC TTGTCTCCGA TGTCACCGAA CTGAAGCTCG CCGAAGAGGA GAAGGTCCGG CTGGAATCCC AGCTCCAGCA GGCGCAAAAG CTCGAATCGG TGGGACGGCT GGCGGGCGGG GTGGCGCACG ACTTCAACAA CCTGCTCACC GTGATACTGG GGCTGGCGCA ACTGGGGATC AGGGAACTGG AGCCCGGCGA CCCGGTTCGC GGCCGGCTGG AGGGAATCCG GCAGGCGGCC GAGAAGTCCG CGGCGCTGAC GCAACAACTG CTGGGGTTCG CCAGGAAGCA GACCATCGCC CCCATCGTGC TGGACCTGAA CCATACGGTG GAGCAGATGC TGAGCATGCT CAGGCGCTTG GTGGGGGAGA ACATCGAGGT CATCTGGCGC CCGGCGCCGG AGCTTTGGCG GGTCAAGATG GATCCTTCCC AGTTGGACCA GATCCTCGCC AACCTCTGCG TCAACGCCCG CGACGCCATC TCCGACGTCG GCAGGATCAC CATAGAGACC GGAAACGCAA CGCTCGGCAA GGAGTACTGC GCCTCCCACT TCGGGTTCGT TCCAGGCGAG TACGTGCAGT TGACGGTGAG CGACGACGGC TGCGGCATGG AAAAGGAGAT GATCGCGCAC ATCTTCGAGC CTTTCTTCAC CACGAAAAAG CTTGGGAAGG GAACGGGGCT GGGTCTCGCC ACCCTGTACG GCATCGTGAA GCAGAACAAC GGCTTCATCA ACACCTACAG CGAGCCCGGC AAGGGGACGG CCTTCAAGAT CTACCTCCCC CGCCACGACG CGGCAAAGCC ACAGGTTTTG CCTGAACCTG CCGAAAAGCC TGTCTCCCGC GGCCACGAGA CTATCCTGCT GGTGGAGGAC GAGCCGACCA TCAGGGAAGT GACGGTTTCC CTTTTACAGC TGCAGGGGTA CAGGGTGCTG GCAGCGGGAC TGCCCCACGA GGCCCTGGAA CTTGCCCGAG CCCACGCCGA CGAGATCGAC CTGGTGATGA CCGACGTGGT GATGCCCGAG ATGAACGGCA GGGAGCTGGC GCGGAGCCTC CTCGCCATCT CTCCCCGAAT GAAGTGCCTG TTCATGTCGG GATACACGGC CAACGTCATC GCCCACCACG GAGTGCTCGA GGAAGGGGTC AACTTCATCT CGAAGCCGTT TTCCCTGTCG GATCTGGCGG AAAAGGTGCG CGAGGTGCTG GACGCAAAGA CGCCGTGA
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Protein sequence | MKQADAKQRR VETIRIVGIY AIFGLAWIYG SDRVVDWMFE DRALLLRIAV AKGFLFILCT AALLFFLISR YLDRLRAAER ERLEVLDNYR TIFNATNEAI FLHDIDSGSI LDVNQRVLEM YGYTREEALA GEIGMFSAGS APYSQTEAVA KLRKAADAGP QVFQWLSKKK NGEQFWAEVS LKRITTRGKL AIIAVVRDVT ERKRQEDALK EKNAHLRFFF EYAPASLAMF DRKMRYMQVS RRWQSMYGLA DRNLIGLSHY DVFPEITERW KELHRRGLAG EIIREEADRF VRADGTVQWV RWEIRPWYEA VERVGGIVIF TEDITERKLI EDALSANERF LRMLTDQLPG MVGYWDSELR CTFANKAYQE WFGKSPAQMN GITLPELLGE ELFAQNEPYV RRALAGEPQR FERTLVKPGV EKKYTWAHYI PDKVGGVTKG FYVLVSDVTE LKLAEEEKVR LESQLQQAQK LESVGRLAGG VAHDFNNLLT VILGLAQLGI RELEPGDPVR GRLEGIRQAA EKSAALTQQL LGFARKQTIA PIVLDLNHTV EQMLSMLRRL VGENIEVIWR PAPELWRVKM DPSQLDQILA NLCVNARDAI SDVGRITIET GNATLGKEYC ASHFGFVPGE YVQLTVSDDG CGMEKEMIAH IFEPFFTTKK LGKGTGLGLA TLYGIVKQNN GFINTYSEPG KGTAFKIYLP RHDAAKPQVL PEPAEKPVSR GHETILLVED EPTIREVTVS LLQLQGYRVL AAGLPHEALE LARAHADEID LVMTDVVMPE MNGRELARSL LAISPRMKCL FMSGYTANVI AHHGVLEEGV NFISKPFSLS DLAEKVREVL DAKTP
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