Gene GM21_3722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3722 
Symbol 
ID8139096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4287408 
End bp4289945 
Gene Length2538 bp 
Protein Length845 aa 
Translation table11 
GC content63% 
IMG OID644871341 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_003023499 
Protein GI253702310 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGG CTGACGCCAA ACAAAGAAGA GTCGAGACGA TAAGAATCGT CGGCATCTAC 
GCCATCTTCG GCCTGGCCTG GATCTACGGG TCGGACCGGG TCGTGGACTG GATGTTCGAA
GACCGCGCGC TGCTGCTCCG GATCGCCGTC GCCAAAGGCT TCCTCTTCAT ACTCTGCACC
GCGGCGCTCC TTTTTTTCCT GATCAGCCGC TATCTCGACA GGCTCCGCGC CGCCGAACGG
GAGCGGCTCG AAGTCCTGGA CAATTACCGG ACCATCTTCA ACGCCACCAA CGAAGCCATC
TTCCTCCATG ACATCGACAG CGGCAGCATC CTCGACGTGA ACCAGCGGGT GCTGGAGATG
TACGGCTATA CGCGCGAGGA GGCGCTGGCC GGCGAGATCG GCATGTTTTC CGCGGGGAGC
GCCCCCTATT CCCAGACCGA GGCGGTCGCC AAGCTGCGCA AAGCGGCCGA CGCTGGACCG
CAGGTATTCC AATGGCTCTC CAAAAAGAAA AACGGGGAAC AGTTTTGGGC CGAGGTGTCG
CTGAAAAGGA TCACCACCCG GGGGAAGCTC GCCATCATCG CCGTGGTCCG CGACGTGACC
GAACGCAAGA GGCAGGAGGA CGCCCTCAAG GAGAAAAACG CCCACCTGCG CTTCTTCTTC
GAGTACGCGC CGGCCTCCCT GGCCATGTTC GACCGCAAGA TGCGCTATAT GCAGGTGAGC
CGCCGCTGGC AGAGCATGTA CGGGCTCGCC GACCGCAACC TGATCGGGCT GTCGCACTAC
GATGTCTTTC CCGAGATTAC CGAGCGCTGG AAGGAGTTGC ACCGGCGCGG GCTGGCGGGG
GAGATCATCC GGGAGGAGGC GGATCGGTTC GTGCGCGCCG ACGGAACGGT GCAGTGGGTG
CGCTGGGAAA TCCGCCCCTG GTACGAGGCG GTGGAGCGGG TTGGCGGCAT CGTCATCTTC
ACCGAAGACA TAACCGAGCG CAAACTGATC GAGGACGCCT TGAGCGCCAA CGAGCGCTTC
CTGCGGATGC TGACCGACCA GCTCCCGGGC ATGGTCGGCT ACTGGGACAG CGAGCTGCGC
TGCACCTTCG CCAACAAGGC CTACCAGGAG TGGTTCGGCA AGAGCCCGGC GCAGATGAAT
GGGATCACGC TGCCGGAACT GCTGGGGGAA GAACTCTTCG CGCAAAACGA GCCTTACGTG
CGGCGCGCCC TGGCGGGCGA ACCGCAGCGC TTCGAAAGGA CCCTGGTGAA GCCGGGGGTA
GAGAAAAAGT ACACCTGGGC GCACTACATC CCGGACAAGG TGGGGGGCGT CACCAAGGGG
TTCTACGTCC TTGTCTCCGA TGTCACCGAA CTGAAGCTCG CCGAAGAGGA GAAGGTCCGG
CTGGAATCCC AGCTCCAGCA GGCGCAAAAG CTCGAATCGG TGGGACGGCT GGCGGGCGGG
GTGGCGCACG ACTTCAACAA CCTGCTCACC GTGATACTGG GGCTGGCGCA ACTGGGGATC
AGGGAACTGG AGCCCGGCGA CCCGGTTCGC GGCCGGCTGG AGGGAATCCG GCAGGCGGCC
GAGAAGTCCG CGGCGCTGAC GCAACAACTG CTGGGGTTCG CCAGGAAGCA GACCATCGCC
CCCATCGTGC TGGACCTGAA CCATACGGTG GAGCAGATGC TGAGCATGCT CAGGCGCTTG
GTGGGGGAGA ACATCGAGGT CATCTGGCGC CCGGCGCCGG AGCTTTGGCG GGTCAAGATG
GATCCTTCCC AGTTGGACCA GATCCTCGCC AACCTCTGCG TCAACGCCCG CGACGCCATC
TCCGACGTCG GCAGGATCAC CATAGAGACC GGAAACGCAA CGCTCGGCAA GGAGTACTGC
GCCTCCCACT TCGGGTTCGT TCCAGGCGAG TACGTGCAGT TGACGGTGAG CGACGACGGC
TGCGGCATGG AAAAGGAGAT GATCGCGCAC ATCTTCGAGC CTTTCTTCAC CACGAAAAAG
CTTGGGAAGG GAACGGGGCT GGGTCTCGCC ACCCTGTACG GCATCGTGAA GCAGAACAAC
GGCTTCATCA ACACCTACAG CGAGCCCGGC AAGGGGACGG CCTTCAAGAT CTACCTCCCC
CGCCACGACG CGGCAAAGCC ACAGGTTTTG CCTGAACCTG CCGAAAAGCC TGTCTCCCGC
GGCCACGAGA CTATCCTGCT GGTGGAGGAC GAGCCGACCA TCAGGGAAGT GACGGTTTCC
CTTTTACAGC TGCAGGGGTA CAGGGTGCTG GCAGCGGGAC TGCCCCACGA GGCCCTGGAA
CTTGCCCGAG CCCACGCCGA CGAGATCGAC CTGGTGATGA CCGACGTGGT GATGCCCGAG
ATGAACGGCA GGGAGCTGGC GCGGAGCCTC CTCGCCATCT CTCCCCGAAT GAAGTGCCTG
TTCATGTCGG GATACACGGC CAACGTCATC GCCCACCACG GAGTGCTCGA GGAAGGGGTC
AACTTCATCT CGAAGCCGTT TTCCCTGTCG GATCTGGCGG AAAAGGTGCG CGAGGTGCTG
GACGCAAAGA CGCCGTGA
 
Protein sequence
MKQADAKQRR VETIRIVGIY AIFGLAWIYG SDRVVDWMFE DRALLLRIAV AKGFLFILCT 
AALLFFLISR YLDRLRAAER ERLEVLDNYR TIFNATNEAI FLHDIDSGSI LDVNQRVLEM
YGYTREEALA GEIGMFSAGS APYSQTEAVA KLRKAADAGP QVFQWLSKKK NGEQFWAEVS
LKRITTRGKL AIIAVVRDVT ERKRQEDALK EKNAHLRFFF EYAPASLAMF DRKMRYMQVS
RRWQSMYGLA DRNLIGLSHY DVFPEITERW KELHRRGLAG EIIREEADRF VRADGTVQWV
RWEIRPWYEA VERVGGIVIF TEDITERKLI EDALSANERF LRMLTDQLPG MVGYWDSELR
CTFANKAYQE WFGKSPAQMN GITLPELLGE ELFAQNEPYV RRALAGEPQR FERTLVKPGV
EKKYTWAHYI PDKVGGVTKG FYVLVSDVTE LKLAEEEKVR LESQLQQAQK LESVGRLAGG
VAHDFNNLLT VILGLAQLGI RELEPGDPVR GRLEGIRQAA EKSAALTQQL LGFARKQTIA
PIVLDLNHTV EQMLSMLRRL VGENIEVIWR PAPELWRVKM DPSQLDQILA NLCVNARDAI
SDVGRITIET GNATLGKEYC ASHFGFVPGE YVQLTVSDDG CGMEKEMIAH IFEPFFTTKK
LGKGTGLGLA TLYGIVKQNN GFINTYSEPG KGTAFKIYLP RHDAAKPQVL PEPAEKPVSR
GHETILLVED EPTIREVTVS LLQLQGYRVL AAGLPHEALE LARAHADEID LVMTDVVMPE
MNGRELARSL LAISPRMKCL FMSGYTANVI AHHGVLEEGV NFISKPFSLS DLAEKVREVL
DAKTP