| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3714 |
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| Symbol | |
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| ID | 8139088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 4279262 |
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| End bp | 4279819 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644871334 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003023492 |
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| Protein GI | 253702303 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTTGCA AATGTGCCAT CACACTCCTC CTCGCCATCT GGTTTTCTTC TTCCGCGCTC
GGATACAGCG AGCCGTCAGC GCAGGATCTG GAACAGGAAT TAAGCCGCTA CAGCGAACTG
CTCAGAACCG ACGGCAAGAA CCCCCGCTAC CTGAACGGGG TTGGTTTCGC CTGCTACCGT
TTGAACCGGT TCCCCCAGGC CATCGAGGCC TACCAGAAGT CTCTCTCCTA CGATCCGCAA
TCGACCACCT TCAACAACCT CGGCGCGGCC TACCTGCGCC TCAAGCAGTT CGAGAACGCC
GAACACGCTT TCCGTAAGGC CCTGGAACTG GATTCCTCCG CGGTGAAGGC GGCTTACAAT
CTGGCCGTCG CCCTTTACCG GGAAGACCGC TTTTACGCCG CCTACCAGGC CTACCGCGAG
GCCAAGCAGA TAGACGCAGC CTATGTGAAG AAACGGTTTG AAGCCTCGAA CGCGCGGGAC
GAACTGCGCA AAGCTGTCCT GCAGCTGCCC GACAAAGATG CGGCACGCCT TGCGCTTAGA
CGGCTTGAGG CTGAATAG
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| Protein sequence | MLCKCAITLL LAIWFSSSAL GYSEPSAQDL EQELSRYSEL LRTDGKNPRY LNGVGFACYR
LNRFPQAIEA YQKSLSYDPQ STTFNNLGAA YLRLKQFENA EHAFRKALEL DSSAVKAAYN
LAVALYREDR FYAAYQAYRE AKQIDAAYVK KRFEASNARD ELRKAVLQLP DKDAARLALR
RLEAE
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