Gene GM21_3627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3627 
Symbol 
ID8139000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4207073 
End bp4207960 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content60% 
IMG OID644871247 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003023406 
Protein GI253702217 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones148 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTAT TTCTAGCAGG CGGAACCGGT TTTGTAGGCG GACATGTAAG GCAAGCCCTG 
CTTGAGAGTG GCCATAGTAT TCGGCTGCTG GTGCACCGAA AGGGAGCAAG CGAAAAACTC
GCCGGCATCG AAGAGATCGA GGGTGACGCA ACAGTGCCCG AGAGCTTCAC CGATGCCGTC
AAGGGATGCG ACGCCACCAT CAACCTGATC GGCATCATTC GCGAATTCCC CGGGCGCGGC
ATCACCTTCC AGCGGCTTCA CGTCGAAGCG ACCCGCAACA TCATCGCCGC GGCGACGAAA
CACGGCGTGT CGCGCCACCT CCAGATGTCC GCCCTCGGAA CCCGCGCCAA CAGCGAAGCG
CGCTACTTCA AAAGCAAGTT CGAGGCGGAA GAAGCGGTAC GCGCCTCGGG TCTCGACTAC
ACCATCTTCC GCCCCTCCAT CATCTTCGGC CCAAAGGATG ATTTCATCAA CCAACTGGCC
GGGCTCCTCA GGTCGTTGCC GGCGATGCCG GTCATAGGCG ACGGGGAATA CCAATTGCAG
CCCATAAGCG CAGACGACGT GGCACGCTGC TTCGCCGAGG CCTTGGAGAA ACCGGAGGCC
ATAGGCGAGA CCTTCGAGCT CTGCGGTCCC GACCGGTTAA GCTACAACGA GCTCCTCGAC
ACGATAGCGC GGGTCATGGG AAAGGGGCGG GTACTGAAGA TCAAGAATCC GCTGCCGCTG
ATGCGCCTGG TGGTGCCGCT TTTCGAAGGT TTTTCCTTCT TCCCCGTCAC CTCCGATCAG
ATCACCATGC TGGTGCAAGG AAGCATCTGT GACGGCGGCT GGCGCAGGAC CTTCACCTTT
CAGCCCACCC GCCTCGAACC AGGCATCCGC AGCTATCTGA AGCCATAG
 
Protein sequence
MRVFLAGGTG FVGGHVRQAL LESGHSIRLL VHRKGASEKL AGIEEIEGDA TVPESFTDAV 
KGCDATINLI GIIREFPGRG ITFQRLHVEA TRNIIAAATK HGVSRHLQMS ALGTRANSEA
RYFKSKFEAE EAVRASGLDY TIFRPSIIFG PKDDFINQLA GLLRSLPAMP VIGDGEYQLQ
PISADDVARC FAEALEKPEA IGETFELCGP DRLSYNELLD TIARVMGKGR VLKIKNPLPL
MRLVVPLFEG FSFFPVTSDQ ITMLVQGSIC DGGWRRTFTF QPTRLEPGIR SYLKP