Gene GM21_3593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3593 
Symbol 
ID8138966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand- 
Start bp4171635 
End bp4172300 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID644871213 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_003023372 
Protein GI253702183 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones148 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TCGCTCCATC CATTCTTTCC GCAGACTTCG CCCGGCTGGG CGAGGAGATC 
AAGGCCATCG AGGCCGGCGG CGCCGACTAC GTCCACATCG ACGTCATGGA CGGCCAGTTC 
GTCCCCAACA TCACCATCGG TCCGCTGATC GTGGAAGCGG CGCGCCGGGT CACCACGCTG 
CCGCTCGACG TGCACCTGAT GATCGACAAC CCGGACCGCT ACATCCCAGA CTTCGCCAAG 
GCGGGGTCGG ACATCATCGT GGTCCACGCC GAGGCGACCA ACCACCTGCA CCGTACCGTG 
CAACTGATCA AGTCGCTCGG GAAGAAGGCG GGCGTCTCGC TGAACCCGGC GACCCCGCTG 
AACCTTCTGG ATTACGTGAT GGAGGACCTC GACCTGATCC TCCTGATGAC GGTGAACCCC 
GGTTTCGGCG GGCAGTCGTT CATCGAGGCC TGCATCCCGA AGATCCAGGC CCTGCGCGCC 
ACCATGGATA GGCGCGGCAT CGAGGCGGAA CTCGAGGTCG ACGGCGGCGT CAAGATCGAC 
AACATAGCGC GCATCTCCCA TGCCGGGGCG GACGTCTTCG TGGCCGGCAG CGCCGTTTTC 
AACAGCCCCG ACTACGCGGC GACCATCGCG GAGCTGAAGA AAAAGGCCAA GGAGCCGGTG 
CTCTGA
 
Protein sequence
MKKIAPSILS ADFARLGEEI KAIEAGGADY VHIDVMDGQF VPNITIGPLI VEAARRVTTL 
PLDVHLMIDN PDRYIPDFAK AGSDIIVVHA EATNHLHRTV QLIKSLGKKA GVSLNPATPL 
NLLDYVMEDL DLILLMTVNP GFGGQSFIEA CIPKIQALRA TMDRRGIEAE LEVDGGVKID 
NIARISHAGA DVFVAGSAVF NSPDYAATIA ELKKKAKEPV L