Gene GM21_3590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3590 
Symbol 
ID8138963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand+ 
Start bp4169059 
End bp4169745 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content63% 
IMG OID644871210 
ProductHhH-GPD family protein 
Protein accessionYP_003023369 
Protein GI253702180 
COG category[L] Replication, recombination and repair 
COG ID[COG2231] Uncharacterized protein related to Endonuclease III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones151 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGACA AGCTGGACAA AGAACGAACC CGGGCCGCGC TCATGGAGCT CTTCGAGGCG 
CTCCTCGCCC GCTACGGGGC GCTCAACTGG TGGCCCGCCG ACACCCCCTT CGAGGTCTGC 
GTCGGCGCCA TCCTGACCCA GAACACCAAC TGGCTCAACG TCGAAAAGGC AATAGTGAAC 
CTGAAACGAG AGGGGCTCCT CTCGGCAGAG GCGCTCCGGG AGATCGATGA GGGGCGGCTG 
GCCGAGTCGA TACGCCCCTC TGGCTTTTTC AACGTAAAGA GCGCGAGGCT GAAAGGTTTC 
GTGGAGTGGC TTTTGGAGCG CTACGGCTCC CTGGACGCCA TGTTCGAGGG GGACTGGGTC 
CGGCTGCGGG AAGAACTCTC CGCGGTGCGC GGCATAGGGC CCGAGACCTG CGACTCCATT 
CTCCTCTACG CGGGGGGAAA GCCTTCCTTC GTGGTCGACG CCTATACCAG GCGTCTCTTC 
TCAAGGCTCG GGCTGGTGCG GGAAGAGGAC GACTACCACC AGGTGCGCGC CCTTTTCATG 
GACCACCTCC CCGCTAAGGT TCCCCTCTTC AACGAGTACC ATGCCCTGAT CGTCGAACAG 
TGCAAGCGGC ACTGCCGCAA GAAACCGCTG TGCGAAGGGT GCCCGCTCTC CCGCTTTTGC 
ACGCTCCCCG CGGCAGGCAA CCCCTGA
 
Protein sequence
MKDKLDKERT RAALMELFEA LLARYGALNW WPADTPFEVC VGAILTQNTN WLNVEKAIVN 
LKREGLLSAE ALREIDEGRL AESIRPSGFF NVKSARLKGF VEWLLERYGS LDAMFEGDWV 
RLREELSAVR GIGPETCDSI LLYAGGKPSF VVDAYTRRLF SRLGLVREED DYHQVRALFM 
DHLPAKVPLF NEYHALIVEQ CKRHCRKKPL CEGCPLSRFC TLPAAGNP