| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3582 |
|---|
| Symbol | |
|---|
| ID | 8138955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 4163121 |
|---|
| End bp | 4164344 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644871202 |
|---|
| Product | Tol-Pal system beta propeller repeat protein TolB |
|---|
| Protein accession | YP_003023361 |
|---|
| Protein GI | 253702172 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
|---|
| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 154 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATAC TAATGCTTTT GGCCATGCTG CTCCTGGCGC CTCAAATGGC GCAGGCGGCA
GAGGGATACA TAGACGTAAC GGCCCCGGTG AGCCGCAAGC TCAAGCTCTT CCCGGCTCCC
ACCACCGCCC TCGCCGGGCA GGTGACCCCG GAGGTTTCCA GGGAGCTCTC CGAGCTGTTC
GGGATGGACC TGGGGTTGGC CGGCCCCTTC GAGGTCTCCG GGGACGGCGC GGGCGCAGAC
CTGATCCTGA AAAGTTCCTA CAGCGCGCAG GGGGGCAACA TCACCCTGGA GTGCCGGCTG
GTGGACCGGG TGCTGAACCG CGAGATCACC GCCAAGCGCT ACAGCGGGTC GTCCAAGGAA
TTGCGCCGCA TGGGGCATGC CTTCTCCGAC GAGGTGCTGC GCGCGGTGAC CGGGGAAAAA
GGTCCCTTCA CCGGCAAGAT CGCCTACGTG ACGAAGATCT CCGGCAACAA AGAGATCTTC
GTCATGGACT ACGACGGGCG CAACCCGCAG AGGCTCACCA ACAACGGCTC CATCAACCTG
AAGCCCGACT TCGCCCCCTC CGGCAAGGAG ATCATCTACA CCTCCTATAA GAAAGGGAAC
CCGGACCTGT ACCGCCGCGA ACTCTTCACC GGGCTCGAGG CGCGCATCTC CTCCAGAAAC
GGCCTGAACG CCATGGGCGC CTACTCCCCC GATGGCGGCA AGATAGCCAT GGTGATGAGC
AAGGACGGCA ACTCCGAGAT CTACCTGATC TCGCGGGAAG GCAAGGAACT CGCGCGGCTC
ACCAACAACC ACGCCATCGA CGTCTCCCCG GCCTGGTCGC CCGACGGCTC CCGCATCGCC
TTCGTCTCCG ACCGCCTGGG CAAACCCCAG GTCTTCGTAA TGAACGCGGA CGGCGGCAAC
CTCCGCAGGC TCACCACCAA CGGCGCCTAC AACGTCACGC CGCGCTGGTC GCCCAAAGGG
GACCGAATCG CGTACGCGCG CCAGGGGGGA GGCGGGTTCC AGATCCACGC CATCAACCCC
GACGGTACCC AGGACACCCA ACTCACCAGC GCAGGGAGCA ACGAGCACCC CCGCTTCTCG
CCGGACGGCC GCTTCATCGT CTTCAGCTCC ACCCGCGACG GCGCCGAGGC GATCTACCTG
ATGCGCGCCG ACGGGAGCGG CCAGACCAGG GTCTCCCCCA ACAAGGCCCA GAATTCCCAT
CCGACCTGGT CGGTAAATTG GTAA
|
|---|
| Protein sequence | MRILMLLAML LLAPQMAQAA EGYIDVTAPV SRKLKLFPAP TTALAGQVTP EVSRELSELF
GMDLGLAGPF EVSGDGAGAD LILKSSYSAQ GGNITLECRL VDRVLNREIT AKRYSGSSKE
LRRMGHAFSD EVLRAVTGEK GPFTGKIAYV TKISGNKEIF VMDYDGRNPQ RLTNNGSINL
KPDFAPSGKE IIYTSYKKGN PDLYRRELFT GLEARISSRN GLNAMGAYSP DGGKIAMVMS
KDGNSEIYLI SREGKELARL TNNHAIDVSP AWSPDGSRIA FVSDRLGKPQ VFVMNADGGN
LRRLTTNGAY NVTPRWSPKG DRIAYARQGG GGFQIHAINP DGTQDTQLTS AGSNEHPRFS
PDGRFIVFSS TRDGAEAIYL MRADGSGQTR VSPNKAQNSH PTWSVNW
|
|---|
| |