Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3579 |
Symbol | |
ID | 8138952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 4161269 |
End bp | 4161943 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644871199 |
Product | protein TolQ |
Protein accession | YP_003023358 |
Protein GI | 253702169 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 149 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCATGT TCGCTTCGAC CGGCCTGGTC GTAAAACTGG TACTTTTCCT TTTGCTCTAT TTCTCGGTCG TTTCCTGGGG CATCATCTTC TACAAGCTGC TGCAGGTCTC CCGCGCCAAC GGCGCCTCCG AGCGCTTCCT CGACTTCTTC TGGAAGGCCA AGCGCTTCGA CGCCATCAAC GGCCAGTTGG ACCGGTTCAC CAACTCCCCC CTCACCGTAT TGTTCCAGGA AGGGTATGGG GAGCTGAAGA AGCTCCAGGA GAAGGTGGAG GAGAAAGCCG ATCCCACCAG CATCAGCACC GACCTGGGGG GGATCGACAA CATCGCCCGC GCCCTGCGCC GCGCCACCAC CTCAGAGATC ACCCGTCTGG AGAAATACCT GACCTTCCTC GCCACCACAG GCGCCACCGC CCCCTTCATC GGCCTCTTCG GCACCGTCTG GGGGATCATG ACCGCCTTCG AGAAGATCGG CCAGACAGGG TCGGCCTCGC TCGCCGTCGT CGCCCCGGGG ATCGCCGAGG CGCTCATCGC CACCGCCATC GGTCTGGTAG CGGCGATACC GGCCGTCATG GGGTACAACC ACTTCCAGCA CAAGATCAAG GTGCTCATCT CGGAGATGGA CAGCTTCTCC ACCGAGTTCC TCAACATCGT GCAACGCAAC TTCGCAGGGA GATAA
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Protein sequence | MGMFASTGLV VKLVLFLLLY FSVVSWGIIF YKLLQVSRAN GASERFLDFF WKAKRFDAIN GQLDRFTNSP LTVLFQEGYG ELKKLQEKVE EKADPTSIST DLGGIDNIAR ALRRATTSEI TRLEKYLTFL ATTGATAPFI GLFGTVWGIM TAFEKIGQTG SASLAVVAPG IAEALIATAI GLVAAIPAVM GYNHFQHKIK VLISEMDSFS TEFLNIVQRN FAGR
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