| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3565 |
|---|
| Symbol | |
|---|
| ID | 8138937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 4140021 |
|---|
| End bp | 4143353 |
|---|
| Gene Length | 3333 bp |
|---|
| Protein Length | 1110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644871184 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003023344 |
|---|
| Protein GI | 253702155 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01905] doubled CXXCH domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 121 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAA AAATGGTCAT GATCCTAGTG TTGCTTCTGG CCATGCCGGC CTTTGCCAAC
GCATGGTATG TCAATGCGAA GACTTCGCCG ACCAGCGGTG CGGGCACCAT CACCCCGTCG
GGCAACAGGA CCTATGCCGC GGGGGTGAAC AGCGAGGAGT TCACCGTCAC TCCGGCTCCG
GGCTACACCC TTTCCCGCGT CACGCTCGAC GGCGTCGCCA TCGCCCCCAA CGCAAACGGG
AAGTACGTCG CACCTTACGT CTCGACCCTG ACCTGGCGCT ACATGGTGGC AGTCTTCTCG
GCCGGCACGG TGAACATCAC TACGAGCGTT ACCAGTGGGG GCGCCATTCG CGAGGCCAAC
TATCTCTCGC TCACCTCCAT CCCGGTCGGT TCCACCCGGA CCCTCTTGGT ACTTCCGAAC
AGCGGCTACG AAATCAGCAC CTTGACCGCC AGCGGCACCC CTTCCGTAAC CGTCCAGGGG
GATGGCTCCC GGTTGGTCAC CTACAACAAC CTGCAGGCGA ACCAGAGCGT CACTGCCGGC
TTCTCGCTGA TCCCGATCGT GGTCGCCAAC GCCGGCAGCG ACGTCACCAC TACGGGCACA
GGCGCGGCTT ACGCGACGAC CCTCTTCGGC AGCAACAGCA GCAGCAACCA GGGGGCGATC
AACTACCAGT GGAGCGGACC GGCGGCTTTG ATGTTCGGCT CGCCCACTTC CGCCAATACC
ACCGTATATT CGGACATCCC CGGGGATTAC ACGGCGACAC TCACCATCAC CTCGAACGGC
ATCACCCGTT CCGATACGGC CATCGTGCAT GTCGTCACTC GGAACTCCTA TCTCGTGTCT
CAGTGCACCA CGTGCCATTC CGGAAACACC ACGGCGCTGG TCGGCCTTTA CAACAGCTCG
CCGCATCTTG AAACCAACGC CTGCCAGGGC TGCCACACCG ACAGCCCGCA CGTGGCGCTG
CCGTCGCCCA ACGTCTGCGC CGATTGCCAC ACGGACACCT CGCGCCATCC CTTCGAGATC
ACCGACACCT GCACCTCCTG CCACAACTCG CACTCGACCG TTGTCGGGGC GACGGCGATG
CCGGACGGTT TGCATTACAA CAACATCACC ACCGGCATGT ACCCCGCCTC CTTCGTGACC
TCGCGCGCCG CCTGCGCCAA CTGCCACAAC AACACGATTT CCAACAAGGC GATCAGGATA
CAGTGGCGCG CGGCGCGCCA CGCTAACATC ACCTCCATGG GGTGGATCGC CAGGGACTTC
AAGACCCTTA ACGGCTGCGT GCGCTGCCAC ACCACCACCG GCTTCATCGC CTACTCCACG
GGCAAGGTGA CGGCGGCGTG GGGCGTGGCC GCAGACAAGA CCAAGGAAGT ACTTACCTGC
ATCGGCTGCC ACAGCGACAG CGTGTCCGGG GCGGTGCGCA CCATGGCGCA GGTTGCGCCG
TACCCCGACA ACAGCTTCGT CACCCCCGAC ACCGGCAAGT CCAACGTCTG CCTCCCCTGC
CACTCGGGCA CCAGCAGCGG CGAGAGCATC AAGGCGCTTT TGCAGGCCCA GGCAGACTTC
GGCAACACAG GCTTCGTGAA CCCGCACTAC AAGGCGGCCA CCGGCTCCCT CTACGGCGTG
GCCGGCTACC ACTTCTCGGG GCGCAGCTAC ACCACCGAAG CGACCCACAA CCATCTGGGC
ATCAGCGACG GCGGCGGGGC CTGCGTCTCC TGCCACAGAA ACAGCATGAA CGGCCACACC
TTCCAGGGTG AGGTGACCCC GGTCTGCGCC ACCTGCCACG GCACCAGTCT GGACGAGGCC
TCCCTGCACG TGGACCACAA CTACTTCCTG AACGCCCTCG AGGTGCTGAG GGCTCAGTTG
GCCGCCAAAG GCTACGCATA TTCGCTCACC AGCCGCAGCT TCAACGCCAC CAACTGGGGC
GCCGGTCAGG GGGGCGCCGA CACAATGGGC GCCGCGTTCA ACTACGCGCT GCTCGTCTCC
GAGCAGGCCG CCTTCGTGCA CAACCCGAAA TACGCCCAGG AACTGGTGAT CGATTCCATC
GATTACCTGG ACAACGGCCA GTTCGACGAT TCAGTGGCCG GCACCGTGCA GGCCCTGCTT
GACTCGGGAG CGATCAGCCA GGAGGTCGCC GACAGTTTCG GCACCTACAA GCAGAAGAAC
ATCTGCCTCT CCTGCCACGG CGGCGACGCG ACCACCTCGC GCCCCATGGC CAGCAACGGT
CATCCTTCGC ACCTGAGCGG GGCCTGGGGG CCGCAGGATT ACCTGCGCAC GCAGAGCTCG
AGCTGCGAGC CCTGCCACGG CAACGACTTC GCCCTGCACT CCAACGGCAC CGTCAACGTG
TCGAGCGACG CGGGCTCCTC CTGCGCAAAC TGCCATGCCG GTTCGGTTCC CGCCTGGAAC
TCCACGGCCC GGATCGCCTG CGAGGTCTGC CACTCGGCGA ACCCGGCAAG GCTTCCCAAC
GGAGTGGCGG CGCCTTCCAA GGAGAGTTTC GCCACCTCCG GCCACGGGCA GTTCGGCGCC
AGCAACCAGT GCACCATCTG CCACAACCCC GACAGCCGCC ACATCTCCGG CAGCCTCGGA
ACCTACAAGA GGCTGAAGCT GCAAAACGAC AACAACCTCT GCGCCTCCTG CCACGACAGC
GTGGTGGCGC AGCAGATGCC GACTCACCAT GGCCTTGCCT GCGTGCAGTG CCACGATCCG
CACGGAAACG GCAACATCAA GATGGTACGG GGCACGATCG GGACGCAGAG CATCACCTAC
CTGAACTCCT TGAACAACTT CGTGGACCAG ACTACCAACA AGGGGCTTTG CCAGGTCTGC
CACAGCTCCA CCCGCTACTA CCGCGCGGGG ATCAGCGAAA GCAGGCACTA CACTACTGGG
TGCCTTGGCT GCCACTTCCA CTACAACCCC GACGGCGCCT TCTTGCCCAG CGGCGGCGCC
TGCGACTCCT GCCACGGTTA TCCGCCCGCT CCGAAGAACA CGGCGACCAG CTTTGGCAGC
GACTCCAACT GGGCCAACGC TCGCTACGAG GACTATTCCG GAGGCGGCGG CGCGCACCTG
GTGGCGGCCC ACGTCTCCCC CTTCGCCACG ACGACCGACG GCTGGAGCAA CTGCACCGTC
TGCCACAACG GCGGCTACCA TGAAATGACC ACACCGGTGG CGGAACACAT CGGCAACGTC
ACCGTGATGG TGGACAACAG CCTGCGCTTT GCCGACAGCT TCACGGTCTA CACCGGCGCG
AAGCTGACCA ACGCGGGGCC GAACGCCACG GGAAGCTGCT TCAACATCGC CTGCCACATG
AGCCCGTCAA TAAGGTGGAG TACGGAAAGA TAG
|
|---|
| Protein sequence | MFKKMVMILV LLLAMPAFAN AWYVNAKTSP TSGAGTITPS GNRTYAAGVN SEEFTVTPAP
GYTLSRVTLD GVAIAPNANG KYVAPYVSTL TWRYMVAVFS AGTVNITTSV TSGGAIREAN
YLSLTSIPVG STRTLLVLPN SGYEISTLTA SGTPSVTVQG DGSRLVTYNN LQANQSVTAG
FSLIPIVVAN AGSDVTTTGT GAAYATTLFG SNSSSNQGAI NYQWSGPAAL MFGSPTSANT
TVYSDIPGDY TATLTITSNG ITRSDTAIVH VVTRNSYLVS QCTTCHSGNT TALVGLYNSS
PHLETNACQG CHTDSPHVAL PSPNVCADCH TDTSRHPFEI TDTCTSCHNS HSTVVGATAM
PDGLHYNNIT TGMYPASFVT SRAACANCHN NTISNKAIRI QWRAARHANI TSMGWIARDF
KTLNGCVRCH TTTGFIAYST GKVTAAWGVA ADKTKEVLTC IGCHSDSVSG AVRTMAQVAP
YPDNSFVTPD TGKSNVCLPC HSGTSSGESI KALLQAQADF GNTGFVNPHY KAATGSLYGV
AGYHFSGRSY TTEATHNHLG ISDGGGACVS CHRNSMNGHT FQGEVTPVCA TCHGTSLDEA
SLHVDHNYFL NALEVLRAQL AAKGYAYSLT SRSFNATNWG AGQGGADTMG AAFNYALLVS
EQAAFVHNPK YAQELVIDSI DYLDNGQFDD SVAGTVQALL DSGAISQEVA DSFGTYKQKN
ICLSCHGGDA TTSRPMASNG HPSHLSGAWG PQDYLRTQSS SCEPCHGNDF ALHSNGTVNV
SSDAGSSCAN CHAGSVPAWN STARIACEVC HSANPARLPN GVAAPSKESF ATSGHGQFGA
SNQCTICHNP DSRHISGSLG TYKRLKLQND NNLCASCHDS VVAQQMPTHH GLACVQCHDP
HGNGNIKMVR GTIGTQSITY LNSLNNFVDQ TTNKGLCQVC HSSTRYYRAG ISESRHYTTG
CLGCHFHYNP DGAFLPSGGA CDSCHGYPPA PKNTATSFGS DSNWANARYE DYSGGGGAHL
VAAHVSPFAT TTDGWSNCTV CHNGGYHEMT TPVAEHIGNV TVMVDNSLRF ADSFTVYTGA
KLTNAGPNAT GSCFNIACHM SPSIRWSTER
|
|---|
| |