| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3558 |
|---|
| Symbol | |
|---|
| ID | 8138930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 4122182 |
|---|
| End bp | 4123042 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644871177 |
|---|
| Product | cytochrome c assembly protein |
|---|
| Protein accession | YP_003023337 |
|---|
| Protein GI | 253702148 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 157 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCTATT ACGAAGCGAT ATTTTTCTGG ATGGCGCTGG TGATCTACGC ACTGTCTGCC
GGCGGCTACA TCTACGCGCT GGTGTTCAGA AACGACAGGA TCGTCCCGAA GCTGCTTGTT
CTGATCGGTG CCGGCCTCGC GGTCCACACC GGCGCCGTGG CGGCGCGCTA CCTGGCCCAG
GGGCATTTCC CCTGGAGCAC CGACTACGAA AACGGCCTGA TGGGGGGATG GTTCATCGTC
GCCTCCACGC TGTACGTCGC CTGGCGCCAA AAGCCGTTGC GCGTCCTCGC CGTGGCCAGC
GTCCCCACCG CCATGCTGAT CATGGGGTAC GGGGTGATGC GCAACCCGAC CCTCGCCCCG
ATGGCGGCGA CACTCAAATC TTTCTGGCTC GGCATCCACG TCTTCTTCGC CTGGCTATCC
TTCGGGGCCT ACGTGCTCTC CATGGCGGCA GGGGTCATCT ACCTGCTGAA GGAACGCGCA
GCGGAGAAAG GAGAGAAAGG GGAAGCGGTC CCCAGGGAAG CAGGCCCCGA CCGGTTCGCG
GAACTCGCCC CGGAACGGCT GGACGACCTG ATGTTCAAGT ACCTGGTCTT CGGCTTCATC
ACCAACGCCA TCATGATCGC CGCCGGCGCC ATCTGGGCCA AGGACCTCTG GGGAGCCTAC
TGGAGCTGGG ACCCGGTGGA GACCTGGTCG CTCATCTCCT GGCTCATGTA CGGCGCCGCC
ATTCACCTGA GGGTCACCAT GGGGTGGCGC GGCACCCGCT TCTCCTGGCT CATGATCGGC
GCGCTCCTCA CCGTCATCAT CAACTTCTTC GGCGTCTCTA TCCTCATGAA GAGCTCCGTC
CATGTCTTCA AGTTCGCCTG A
|
|---|
| Protein sequence | MAYYEAIFFW MALVIYALSA GGYIYALVFR NDRIVPKLLV LIGAGLAVHT GAVAARYLAQ
GHFPWSTDYE NGLMGGWFIV ASTLYVAWRQ KPLRVLAVAS VPTAMLIMGY GVMRNPTLAP
MAATLKSFWL GIHVFFAWLS FGAYVLSMAA GVIYLLKERA AEKGEKGEAV PREAGPDRFA
ELAPERLDDL MFKYLVFGFI TNAIMIAAGA IWAKDLWGAY WSWDPVETWS LISWLMYGAA
IHLRVTMGWR GTRFSWLMIG ALLTVIINFF GVSILMKSSV HVFKFA
|
|---|
| |