Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3550 |
Symbol | |
ID | 8138922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 4111489 |
End bp | 4112715 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644871169 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003023329 |
Protein GI | 253702140 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 161 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACCTGC GCATTCTCAA AAACTCCATC CTCAAGCGCC CAAAGCCCGT GGCTTTGGTG CTCCTCTCCA TCGTGATGGG ATCCGCCGTC GCCACCGCCT TCCTGGGGAT CTCCGGAGAG CTGTCGCACA AGATGGCGCT GGAGCTCAGA AGCTACGGCG CCAACATCGT CCTGGAGCCG GCGGCCGGAG AGGCGGGTGC GCTCAACTCC GACGACCTTC CCAAAATCAA GACCATCTTC TGGAAGCACA ACATCGTGGG TTTCGCCCCC TTTCTTTTCG GGCAGGTCGA CTTTTCCGCC CCCGGCGGGC GGGAGCGTGG CGTACTGGCC GGCACCTGGT TCGGCAGGCC GTTGCAGGTC GAGGGTGAGC CGGAGAGCAT CCAGGGGGTG AAGGTGACCG CTCCCTGGTG GGAGCTCACC GGCCGCTGGC CCGAGACCCC GGACGAGGCC GTGGTGGGGG CATCGCTCGC CAAAAGGCTG CGCCTTGCCG AGGGGTCGGA AATCGTGGCC GGCGCCGGCG GCACAAGCCG CAGCTTCAGG GTGGTCGGTA TCGCCGCCAC CGGCGGCTTC GAGGAGGAGC AGCTCTTCGC CCCGCTGGCC GAGGTGCAGG CCCTCCTCGG GAAGCCGGGG AAGCTCTCGC GCGTCCTGGT GAGCGCGCTC ACCGTCCCGA TGGACGACTT CGGCAGGAAG GATCCCGCCT CCATGAGCAA GGACGAGTAC GAGAAGTGGT ACTGCACCGC CTACGTCACC TCGGTGGCCA AGGGGGTGGA GGAGGCGATG GCCGGCAGCC GTGCCAAGCC GATCTGGCAG ATCGCCGGCG CCGAGGGGGC GCTTCTTGAG AAGCTGAACA GCCTGATGCT GCTTTTAACC GTGCTGGCGC TTTGCTCCGC CGCCATCGCC GTCTCGTCGA GCCTCATGGC GTCCATGGCC GAGAGAAGCG GCGAGATCGC CCTGATGAAG GCGATGGGCG CCGACCGCAT CCAGATCGCG TCCATCTTCC TGGGGGAGAC CATGGCGATA GCGCTTCTGG GCGGGGTGAT CGGGTACTTC GCCGGGGACC GGCTCGCCGT CGTCGTCAGC CGCGCCGTCT TCGATTCGGC CGTGGCCTCG CCGGTCTGGC TTTTCCCCAC CGCCCTCGGA TCGTCCTTCC TGGTGGCGCT TCTGGGGAGC CTCGCGCCGC TGAAAAGGGC GCTTGCCGTG GAGCCGGTAC GGGTCCTCAA GGGGTGA
|
Protein sequence | MHLRILKNSI LKRPKPVALV LLSIVMGSAV ATAFLGISGE LSHKMALELR SYGANIVLEP AAGEAGALNS DDLPKIKTIF WKHNIVGFAP FLFGQVDFSA PGGRERGVLA GTWFGRPLQV EGEPESIQGV KVTAPWWELT GRWPETPDEA VVGASLAKRL RLAEGSEIVA GAGGTSRSFR VVGIAATGGF EEEQLFAPLA EVQALLGKPG KLSRVLVSAL TVPMDDFGRK DPASMSKDEY EKWYCTAYVT SVAKGVEEAM AGSRAKPIWQ IAGAEGALLE KLNSLMLLLT VLALCSAAIA VSSSLMASMA ERSGEIALMK AMGADRIQIA SIFLGETMAI ALLGGVIGYF AGDRLAVVVS RAVFDSAVAS PVWLFPTALG SSFLVALLGS LAPLKRALAV EPVRVLKG
|
| |